Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 AL158211.5-201ENST00000623583 2518 ntBASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLHC1Q8NHS4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 AL356652.1-201ENST00000615962 565 ntBASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 AC087633.2-202ENST00000565166 1439 ntBASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLHC1Q8NHS4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 KRT18P5-201ENST00000436075 1291 ntBASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLHC1Q8NHS4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 BX119927.1-201ENST00000636596 1552 ntBASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CLHC1Q8NHS4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 MFSD11-216ENST00000590393 1141 ntBASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 AC013268.1-206ENST00000638368 961 ntBASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 AC112229.1-201ENST00000639295 961 ntBASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CLHC1Q8NHS4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
CLHC1Q8NHS4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms