Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.56■□□□□ 0.4
CPEB3Q8NE35 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 MIR4758-201ENST00000577688 71 ntBASIC17.56■□□□□ 0.4
CPEB3Q8NE35 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 AL391422.3-201ENST00000603791 2761 ntBASIC17.56■□□□□ 0.4
CPEB3Q8NE35 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.55■□□□□ 0.4
CPEB3Q8NE35 DUSP5P2-201ENST00000426873 1033 ntBASIC17.55■□□□□ 0.4
CPEB3Q8NE35 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.55■□□□□ 0.4
CPEB3Q8NE35 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPEB3Q8NE35 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 PTBP1P-201ENST00000554374 1601 ntBASIC17.54■□□□□ 0.4
CPEB3Q8NE35 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 AC098934.4-201ENST00000564127 592 ntBASIC17.54■□□□□ 0.4
CPEB3Q8NE35 AC142086.2-201ENST00000569753 217 ntBASIC17.54■□□□□ 0.4
CPEB3Q8NE35 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 AC073130.3-201ENST00000624389 2278 ntBASIC17.54■□□□□ 0.4
CPEB3Q8NE35 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.54■□□□□ 0.4
CPEB3Q8NE35 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 AC091874.3-201ENST00000512672 1195 ntBASIC17.53■□□□□ 0.4
CPEB3Q8NE35 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.53■□□□□ 0.4
CPEB3Q8NE35 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 AL355802.2-201ENST00000402069 882 ntBASIC17.52■□□□□ 0.4
CPEB3Q8NE35 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms