Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
ZNF248Q8NDW4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 AL353807.1-201ENST00000427475 662 ntBASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 AC145285.6-201ENST00000604632 637 ntBASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 AC244015.2-201ENST00000616358 1861 ntBASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF248Q8NDW4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 AF186192.3-201ENST00000583427 947 ntBASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF248Q8NDW4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 MIR6786-201ENST00000616843 113 ntBASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF248Q8NDW4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms