Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.27■■□□□ 1
TMEM35BQ8NCS4 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.27■■□□□ 1
TMEM35BQ8NCS4 TSPY6P-201ENST00000448518 926 ntBASIC21.27■■□□□ 1
TMEM35BQ8NCS4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM35BQ8NCS4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
TMEM35BQ8NCS4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 TCF3P1-201ENST00000423021 1937 ntBASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 AL031963.3-201ENST00000606441 850 ntBASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 KRT8P17-201ENST00000453110 1448 ntBASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM35BQ8NCS4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 GUSBP6-202ENST00000438529 1198 ntBASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM35BQ8NCS4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 KRT8P20-201ENST00000423953 1409 ntBASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 AC090192.1-201ENST00000517740 490 ntBASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 AC092118.2-201ENST00000613495 667 ntBASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM35BQ8NCS4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 PCDHAC2-203ENST00000615316 3011 ntBASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 AC023632.3-201ENST00000521633 145 ntBASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.23■□□□□ 0.99
TMEM35BQ8NCS4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms