Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 KRT18P68-201ENST00000392293 1000 ntBASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 OR10C1-204ENST00000622521 1039 ntBASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 AC008694.1-202ENST00000636953 945 ntBASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 PCDHAC2-203ENST00000615316 3011 ntBASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.37■□□□□ 0.53
LSMEM1Q8N8F7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 AC105020.6-201ENST00000621523 1217 ntBASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSMEM1Q8N8F7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 AL512625.2-201ENST00000417533 625 ntBASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 CYP2T3P-201ENST00000601990 817 ntBASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.35■□□□□ 0.53
LSMEM1Q8N8F7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 PTBP1P-201ENST00000554374 1601 ntBASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LSMEM1Q8N8F7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LSMEM1Q8N8F7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.33■□□□□ 0.53
LSMEM1Q8N8F7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.33■□□□□ 0.53
LSMEM1Q8N8F7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LSMEM1Q8N8F7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LSMEM1Q8N8F7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms