Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 HLA-B-256ENST00000639848 1089 ntBASIC19.53■□□□□ 0.72
RAB42Q8N4Z0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB42Q8N4Z0 AP005212.1-201ENST00000581547 1997 ntBASIC19.53■□□□□ 0.72
RAB42Q8N4Z0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB42Q8N4Z0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB42Q8N4Z0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB42Q8N4Z0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RAB42Q8N4Z0 KRT8P20-201ENST00000423953 1409 ntBASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB42Q8N4Z0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
RAB42Q8N4Z0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 AC073314.1-201ENST00000568729 2216 ntBASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 AC060766.5-201ENST00000590539 871 ntBASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 AL031963.3-201ENST00000606441 850 ntBASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB42Q8N4Z0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 AC092368.3-202ENST00000574180 1591 ntBASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 AC083880.1-201ENST00000608266 535 ntBASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB42Q8N4Z0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB42Q8N4Z0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms