Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.62■□□□□ 0.57
BEST3Q8N1M1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST3Q8N1M1 AC026310.3-201ENST00000625186 2373 ntBASIC18.62■□□□□ 0.57
BEST3Q8N1M1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 UBE2SP1-201ENST00000450587 669 ntBASIC18.61■□□□□ 0.57
BEST3Q8N1M1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 AC120498.8-201ENST00000614275 531 ntBASIC18.61■□□□□ 0.57
BEST3Q8N1M1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BEST3Q8N1M1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 RPS2P4-201ENST00000476944 856 ntBASIC18.6■□□□□ 0.57
BEST3Q8N1M1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST3Q8N1M1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms