Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUDCD3Q8IVD9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUDCD3Q8IVD9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUDCD3Q8IVD9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 AL358852.1-201ENST00000623174 1268 ntBASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 AL136967.2-201ENST00000623968 743 ntBASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.89■□□□□ 0.77
NUDCD3Q8IVD9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 TREX1-205ENST00000625293 1783 ntBASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 AC004408.2-201ENST00000623613 2777 ntBASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 AC120498.9-201ENST00000339021 3867 ntBASIC19.88■□□□□ 0.77
NUDCD3Q8IVD9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NUDCD3Q8IVD9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 AC008406.3-201ENST00000620001 1374 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 AC007322.3-201ENST00000426526 701 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4L2-201ENST00000561772 1275 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 AC131212.1-201ENST00000613771 668 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 MIR6084-201ENST00000622012 110 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4L6-201ENST00000626483 1275 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4L1-201ENST00000627662 1275 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4L8-201ENST00000629013 1275 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4L3-201ENST00000630187 1275 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4L7-201ENST00000630678 1275 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 DUX4L5-201ENST00000630834 1275 ntBASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NUDCD3Q8IVD9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms