Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AL121603.2-201ENST00000557373 2117 ntBASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 MIR1238-201ENST00000408483 83 ntBASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13BQ7Z7G8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 AC026396.1-201ENST00000419388 421 ntBASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13BQ7Z7G8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 AL031133.1-201ENST00000406807 723 ntBASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13BQ7Z7G8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 INGX-201ENST00000359239 846 ntBASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 AC087388.1-201ENST00000571370 1112 ntBASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 AL031963.3-201ENST00000606441 850 ntBASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 AC004264.1-201ENST00000608354 794 ntBASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VPS13BQ7Z7G8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms