Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 PCDHAC2-203ENST00000615316 3011 ntBASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 PGM5P4-201ENST00000421970 445 ntBASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 AC097381.1-201ENST00000429019 1296 ntBASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 UBE2DNL-204ENST00000602536 740 ntBASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MRPL55Q7Z7F7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 MYCNOS-205ENST00000641950 531 ntBASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 AC099778.1-201ENST00000568593 1911 ntBASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.87□□□□□ -0.35
MRPL55Q7Z7F7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms