Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 CD99P1-205ENST00000527459 561 ntBASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD3Q7Z3D4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 AC007952.6-201ENST00000573168 2673 ntBASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 AC003957.1-201ENST00000625108 2673 ntBASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 AL391422.3-201ENST00000603791 2761 ntBASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD3Q7Z3D4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LYSMD3Q7Z3D4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
LYSMD3Q7Z3D4 LINC01521-201ENST00000504184 1943 ntBASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD3Q7Z3D4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 AL162377.1-201ENST00000618844 1793 ntBASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD3Q7Z3D4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 HLA-B-256ENST00000639848 1089 ntBASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD3Q7Z3D4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms