Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf139Q6ZV77 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf139Q6ZV77 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf139Q6ZV77 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 AC121338.2-201ENST00000622535 1744 ntBASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf139Q6ZV77 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 MIR4785-201ENST00000585005 73 ntBASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 AL121906.2-201ENST00000621597 723 ntBASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C9orf139Q6ZV77 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 HLA-G-202ENST00000376815 851 ntBASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 HLA-G-203ENST00000376818 1127 ntBASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
C9orf139Q6ZV77 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf139Q6ZV77 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
C9orf139Q6ZV77 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
C9orf139Q6ZV77 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C9orf139Q6ZV77 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C9orf139Q6ZV77 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
C9orf139Q6ZV77 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf139Q6ZV77 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf139Q6ZV77 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms