Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 LINC02228-203ENST00000641970 1355 ntBASIC17.41■□□□□ 0.38
C11orf88Q6PI97 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf88Q6PI97 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf88Q6PI97 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
C11orf88Q6PI97 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 AL137784.2-201ENST00000607332 1000 ntBASIC17.39■□□□□ 0.37
C11orf88Q6PI97 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.39■□□□□ 0.37
C11orf88Q6PI97 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 AC007225.1-201ENST00000566331 1836 ntBASIC17.38■□□□□ 0.37
C11orf88Q6PI97 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms