Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.8■■□□□ 1.08
SLC27A1Q6PCB7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 AC110285.5-201ENST00000611501 352 ntBASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 AL121906.2-201ENST00000621597 723 ntBASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC27A1Q6PCB7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC27A1Q6PCB7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 MIR718-201ENST00000390190 70 ntBASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC27A1Q6PCB7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC27A1Q6PCB7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC27A1Q6PCB7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 AL596275.1-201ENST00000423464 877 ntBASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC27A1Q6PCB7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 Z99916.2-201ENST00000604037 246 ntBASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC27A1Q6PCB7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms