Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 AL031963.3-201ENST00000606441 850 ntBASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
SWSAP1Q6NVH7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SWSAP1Q6NVH7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SWSAP1Q6NVH7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
SWSAP1Q6NVH7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SWSAP1Q6NVH7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.39■■□□□ 1.18
SWSAP1Q6NVH7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 AC124016.1-201ENST00000609552 612 ntBASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SWSAP1Q6NVH7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.38■■□□□ 1.17
SWSAP1Q6NVH7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 AC239809.2-201ENST00000415381 517 ntBASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 RPS2P4-201ENST00000476944 856 ntBASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SWSAP1Q6NVH7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 KRASP1-201ENST00000407852 552 ntBASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 AC008550.1-201ENST00000511500 884 ntBASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 AL121829.2-201ENST00000620908 328 ntBASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SWSAP1Q6NVH7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SWSAP1Q6NVH7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SWSAP1Q6NVH7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SWSAP1Q6NVH7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SWSAP1Q6NVH7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms