Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 YLL020CYLL020C 306 nt1.01□□□□□ -2.25
CLP1Q08685 YML007C-AYML007C-A 111 nt1.01□□□□□ -2.25
CLP1Q08685 YAF9YNL107W 681 nt1.01□□□□□ -2.25
CLP1Q08685 YOR199WYOR199W 330 nt1.01□□□□□ -2.25
CLP1Q08685 INP2YMR163C 2118 nt1.01□□□□□ -2.25
CLP1Q08685 BEM2YER155C 6504 nt1□□□□□ -2.25
CLP1Q08685 YDR426CYDR426C 378 nt1□□□□□ -2.25
CLP1Q08685 Q0142Q0142 177 nt1□□□□□ -2.25
CLP1Q08685 RPL40BYKR094C 387 nt1□□□□□ -2.25
CLP1Q08685 SDH2YLL041C 801 nt1□□□□□ -2.25
CLP1Q08685 RPL38YLR325C 237 nt1□□□□□ -2.25
CLP1Q08685 YMR175W-AYMR175W-A 195 nt1□□□□□ -2.25
CLP1Q08685 YPR002C-AYPR002C-A 198 nt1□□□□□ -2.25
CLP1Q08685 YDL240C-AYDL240C-A 138 nt0.99□□□□□ -2.25
CLP1Q08685 YGL217CYGL217C 342 nt0.99□□□□□ -2.25
CLP1Q08685 ZIP2YGL249W 2115 nt0.99□□□□□ -2.25
CLP1Q08685 YPL038W-AYPL038W-A 192 nt0.99□□□□□ -2.25
CLP1Q08685 YPL225WYPL225W 441 nt0.99□□□□□ -2.25
CLP1Q08685 RIM20YOR275C 1986 nt0.99□□□□□ -2.25
CLP1Q08685 YHR007C-AYHR007C-A 216 nt0.98□□□□□ -2.25
CLP1Q08685 INA22YIR024C 651 nt0.98□□□□□ -2.25
CLP1Q08685 SLX4YLR135W 2247 nt0.98□□□□□ -2.25
CLP1Q08685 SWI4YER111C 3282 nt0.98□□□□□ -2.25
CLP1Q08685 NOC3YLR002C 1992 nt0.97□□□□□ -2.25
CLP1Q08685 YDR102CYDR102C 333 nt0.97□□□□□ -2.25
CLP1Q08685 PCC1YKR095W-A 267 nt0.97□□□□□ -2.25
CLP1Q08685 HTB2YBL002W 396 nt0.97□□□□□ -2.25
CLP1Q08685 YOL160WYOL160W 342 nt0.97□□□□□ -2.25
CLP1Q08685 snR14snR14 160 nt0.97□□□□□ -2.25
CLP1Q08685 YDL073WYDL073W 2955 nt0.96□□□□□ -2.26
CLP1Q08685 NPC2YDL046W 522 nt0.96□□□□□ -2.26
CLP1Q08685 YIL142C-AYIL142C-A 333 nt0.96□□□□□ -2.26
CLP1Q08685 SCW11YGL028C 1629 nt0.96□□□□□ -2.26
CLP1Q08685 YDR048CYDR048C 315 nt0.95□□□□□ -2.26
CLP1Q08685 YAR029WYAR029W 225 nt0.95□□□□□ -2.26
CLP1Q08685 YOR108C-AYOR108C-A 210 nt0.95□□□□□ -2.26
CLP1Q08685 NUP188YML103C 4968 nt0.95□□□□□ -2.26
CLP1Q08685 YLL054CYLL054C 2532 nt0.94□□□□□ -2.26
CLP1Q08685 NHP2YDL208W 471 nt0.93□□□□□ -2.26
CLP1Q08685 MAM33YIL070C 801 nt0.93□□□□□ -2.26
CLP1Q08685 TAR1YLR154W-C 375 nt0.93□□□□□ -2.26
CLP1Q08685 YBL008W-AYBL008W-A 240 nt0.93□□□□□ -2.26
CLP1Q08685 RAD34YDR314C 2079 nt0.93□□□□□ -2.26
CLP1Q08685 NUT1YGL151W 3399 nt0.92□□□□□ -2.26
CLP1Q08685 PAU12YGR294W 363 nt0.92□□□□□ -2.26
CLP1Q08685 snR36snR36 182 nt0.92□□□□□ -2.26
CLP1Q08685 PAU24YBR301W 363 nt0.92□□□□□ -2.26
CLP1Q08685 EAF1YDR359C 2949 nt0.92□□□□□ -2.26
CLP1Q08685 SLI15YBR156C 2097 nt0.92□□□□□ -2.26
CLP1Q08685 NIP100YPL174C 2607 nt0.91□□□□□ -2.26
CLP1Q08685 LCD1YDR499W 2244 nt0.91□□□□□ -2.26
CLP1Q08685 YKL118WYKL118W 312 nt0.91□□□□□ -2.26
CLP1Q08685 YKL136WYKL136W 399 nt0.91□□□□□ -2.26
CLP1Q08685 YMR290W-AYMR290W-A 348 nt0.91□□□□□ -2.26
CLP1Q08685 NUP157YER105C 4176 nt0.91□□□□□ -2.26
CLP1Q08685 OST1YJL002C 1431 nt0.9□□□□□ -2.26
CLP1Q08685 FIG4YNL325C 2640 nt0.9□□□□□ -2.26
CLP1Q08685 SMC1YFL008W 3678 nt0.9□□□□□ -2.27
CLP1Q08685 MPT5YGL178W 2580 nt0.9□□□□□ -2.27
CLP1Q08685 YDR413CYDR413C 576 nt0.9□□□□□ -2.27
CLP1Q08685 YFL032WYFL032W 321 nt0.9□□□□□ -2.27
CLP1Q08685 YJR011CYJR011C 786 nt0.9□□□□□ -2.27
CLP1Q08685 SPT21YMR179W 2277 nt0.89□□□□□ -2.27
CLP1Q08685 STB6YKL072W 2301 nt0.88□□□□□ -2.27
CLP1Q08685 PKH2YOL100W 3246 nt0.88□□□□□ -2.27
CLP1Q08685 SLD3YGL113W 2007 nt0.88□□□□□ -2.27
CLP1Q08685 YDR183C-AYDR183C-A 258 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)BtF(GAA)B 73 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)FtF(GAA)F 73 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)GtF(GAA)G 73 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)H1tF(GAA)H1 73 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)H2tF(GAA)H2 73 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)MtF(GAA)M 73 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)P1tF(GAA)P1 73 nt0.88□□□□□ -2.27
CLP1Q08685 tF(GAA)P2tF(GAA)P2 73 nt0.88□□□□□ -2.27
CLP1Q08685 DBP6YNR038W 1890 nt0.88□□□□□ -2.27
CLP1Q08685 YCK3YER123W 1575 nt0.87□□□□□ -2.27
CLP1Q08685 AIM44YPL158C 2277 nt0.87□□□□□ -2.27
CLP1Q08685 SSS1YDR086C 243 nt0.87□□□□□ -2.27
CLP1Q08685 YER097WYER097W 330 nt0.87□□□□□ -2.27
CLP1Q08685 PRP16YKR086W 3216 nt0.87□□□□□ -2.27
CLP1Q08685 YMR160WYMR160W 2451 nt0.87□□□□□ -2.27
CLP1Q08685 CUL3YGR003W 2235 nt0.87□□□□□ -2.27
CLP1Q08685 CDC39YCR093W 6327 nt0.86□□□□□ -2.27
CLP1Q08685 YDL206WYDL206W 2289 nt0.85□□□□□ -2.27
CLP1Q08685 SET3YKR029C 2256 nt0.85□□□□□ -2.27
CLP1Q08685 YFL063WYFL063W 456 nt0.85□□□□□ -2.27
CLP1Q08685 YIR044CYIR044C 186 nt0.85□□□□□ -2.27
CLP1Q08685 APL3YBL037W 3078 nt0.85□□□□□ -2.27
CLP1Q08685 YBR221W-AYBR221W-A 105 nt0.85□□□□□ -2.27
CLP1Q08685 MMS4YBR098W 2076 nt0.85□□□□□ -2.27
CLP1Q08685 STO1YMR125W 2586 nt0.85□□□□□ -2.27
CLP1Q08685 YLL007CYLL007C 1998 nt0.85□□□□□ -2.27
CLP1Q08685 HTL1YCR020W-B 237 nt0.84□□□□□ -2.27
CLP1Q08685 GPG1YGL121C 381 nt0.84□□□□□ -2.27
CLP1Q08685 YGL149WYGL149W 306 nt0.84□□□□□ -2.27
CLP1Q08685 QCR9YGR183C 201 nt0.84□□□□□ -2.27
CLP1Q08685 YIL115W-AYIL115W-A 372 nt0.84□□□□□ -2.27
CLP1Q08685 YMR193C-AYMR193C-A 387 nt0.83□□□□□ -2.28
CLP1Q08685 YBR206WYBR206W 324 nt0.83□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 97.3 ms