Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 snR13snR13 124 nt-0.01□□□□□ -2.41
RFU1Q08003 YPL261CYPL261C 309 nt-0.01□□□□□ -2.41
RFU1Q08003 RAD34YDR314C 2079 nt-0.01□□□□□ -2.41
RFU1Q08003 snR72snR72 98 nt-0.02□□□□□ -2.41
RFU1Q08003 YKL202WYKL202W 582 nt-0.02□□□□□ -2.41
RFU1Q08003 YOL029CYOL029C 606 nt-0.02□□□□□ -2.41
RFU1Q08003 YPL185WYPL185W 396 nt-0.02□□□□□ -2.41
RFU1Q08003 YIL066W-AYIL066W-A 444 nt-0.03□□□□□ -2.41
RFU1Q08003 PRP21YJL203W 843 nt-0.03□□□□□ -2.41
RFU1Q08003 YKL068W-AYKL068W-A 237 nt-0.03□□□□□ -2.41
RFU1Q08003 YGR025WYGR025W 303 nt-0.04□□□□□ -2.42
RFU1Q08003 YIR018C-AYIR018C-A 138 nt-0.04□□□□□ -2.42
RFU1Q08003 YIR044CYIR044C 186 nt-0.04□□□□□ -2.42
RFU1Q08003 YAP6YDR259C 1152 nt-0.05□□□□□ -2.42
RFU1Q08003 YKL044WYKL044W 321 nt-0.05□□□□□ -2.42
RFU1Q08003 PBI2YNL015W 228 nt-0.05□□□□□ -2.42
RFU1Q08003 IPP1YBR011C 864 nt-0.05□□□□□ -2.42
RFU1Q08003 PRP5YBR237W 2550 nt-0.05□□□□□ -2.42
RFU1Q08003 PRP42YDR235W 1635 nt-0.05□□□□□ -2.42
RFU1Q08003 EMC4YGL231C 573 nt-0.06□□□□□ -2.42
RFU1Q08003 YPL182CYPL182C 384 nt-0.06□□□□□ -2.42
RFU1Q08003 ASE1YOR058C 2658 nt-0.06□□□□□ -2.42
RFU1Q08003 YFR012W-AYFR012W-A 87 nt-0.07□□□□□ -2.42
RFU1Q08003 COX5BYIL111W 456 nt-0.07□□□□□ -2.42
RFU1Q08003 ISF1YMR081C 1017 nt-0.07□□□□□ -2.42
RFU1Q08003 YOR053WYOR053W 342 nt-0.07□□□□□ -2.42
RFU1Q08003 SEC8YPR055W 3198 nt-0.08□□□□□ -2.42
RFU1Q08003 OST4YDL232W 111 nt-0.08□□□□□ -2.42
RFU1Q08003 PAA1YDR071C 576 nt-0.08□□□□□ -2.42
RFU1Q08003 YPR160W-AYPR160W-A 81 nt-0.08□□□□□ -2.42
RFU1Q08003 ORC3YLL004W 1851 nt-0.08□□□□□ -2.42
RFU1Q08003 YKL023C-AYKL023C-A 228 nt-0.09□□□□□ -2.42
RFU1Q08003 snR45snR45 172 nt-0.09□□□□□ -2.42
RFU1Q08003 RCO1YMR075W 2055 nt-0.09□□□□□ -2.42
RFU1Q08003 SPO21YOL091W 1830 nt-0.1□□□□□ -2.43
RFU1Q08003 TIM13YGR181W 318 nt-0.1□□□□□ -2.43
RFU1Q08003 SVS1YPL163C 783 nt-0.1□□□□□ -2.43
RFU1Q08003 TSC3YBR058C-A 243 nt-0.1□□□□□ -2.43
RFU1Q08003 YBR206WYBR206W 324 nt-0.1□□□□□ -2.43
RFU1Q08003 snR51snR51 107 nt-0.1□□□□□ -2.43
RFU1Q08003 COG8YML071C 1824 nt-0.1□□□□□ -2.43
RFU1Q08003 BER1YLR412W 825 nt-0.11□□□□□ -2.43
RFU1Q08003 DCP1YOL149W 696 nt-0.11□□□□□ -2.43
RFU1Q08003 BUL2YML111W 2763 nt-0.11□□□□□ -2.43
RFU1Q08003 HAL9YOL089C 3093 nt-0.12□□□□□ -2.43
RFU1Q08003 YDR371C-AYDR371C-A 105 nt-0.12□□□□□ -2.43
RFU1Q08003 YML108WYML108W 318 nt-0.12□□□□□ -2.43
RFU1Q08003 snR190snR190 190 nt-0.12□□□□□ -2.43
RFU1Q08003 SNU56YDR240C 1479 nt-0.12□□□□□ -2.43
RFU1Q08003 PTP2YOR208W 2253 nt-0.13□□□□□ -2.43
RFU1Q08003 HMLALPHA2YCL067C 633 nt-0.13□□□□□ -2.43
RFU1Q08003 YCR001WYCR001W 315 nt-0.13□□□□□ -2.43
RFU1Q08003 MATALPHA2YCR039C 633 nt-0.13□□□□□ -2.43
RFU1Q08003 RPL35AYDL191W 363 nt-0.13□□□□□ -2.43
RFU1Q08003 SSS1YDR086C 243 nt-0.13□□□□□ -2.43
RFU1Q08003 YAL067W-AYAL067W-A 228 nt-0.13□□□□□ -2.43
RFU1Q08003 YLR399W-AYLR399W-A 105 nt-0.13□□□□□ -2.43
RFU1Q08003 LEE1YPL054W 906 nt-0.13□□□□□ -2.43
RFU1Q08003 GRX5YPL059W 453 nt-0.13□□□□□ -2.43
RFU1Q08003 YDL016CYDL016C 303 nt-0.14□□□□□ -2.43
RFU1Q08003 RPS26AYGL189C 360 nt-0.14□□□□□ -2.43
RFU1Q08003 MRPL50YNR022C 420 nt-0.14□□□□□ -2.43
RFU1Q08003 SDH7YDR511W 402 nt-0.15□□□□□ -2.43
RFU1Q08003 YFR009W-AYFR009W-A 258 nt-0.15□□□□□ -2.43
RFU1Q08003 MAM33YIL070C 801 nt-0.15□□□□□ -2.43
RFU1Q08003 NFU1YKL040C 771 nt-0.15□□□□□ -2.43
RFU1Q08003 YLR232WYLR232W 348 nt-0.15□□□□□ -2.43
RFU1Q08003 SEM1YDR363W-A 270 nt-0.16□□□□□ -2.44
RFU1Q08003 YJR011CYJR011C 786 nt-0.16□□□□□ -2.44
RFU1Q08003 YJR141WYJR141W 1044 nt-0.16□□□□□ -2.44
RFU1Q08003 YOR186C-AYOR186C-A 210 nt-0.16□□□□□ -2.44
RFU1Q08003 ULI1YFR026C 510 nt-0.17□□□□□ -2.44
RFU1Q08003 YNL211CYNL211C 261 nt-0.17□□□□□ -2.44
RFU1Q08003 RPS20YHL015W 366 nt-0.18□□□□□ -2.44
RFU1Q08003 YLR171WYLR171W 390 nt-0.18□□□□□ -2.44
RFU1Q08003 YNL146WYNL146W 303 nt-0.18□□□□□ -2.44
RFU1Q08003 YOR345CYOR345C 351 nt-0.18□□□□□ -2.44
RFU1Q08003 YHL046W-AYHL046W-A 327 nt-0.19□□□□□ -2.44
RFU1Q08003 NNF2YGR089W 2811 nt-0.2□□□□□ -2.44
RFU1Q08003 YJL020W-AYJL020W-A 258 nt-0.21□□□□□ -2.44
RFU1Q08003 YJL047C-AYJL047C-A 135 nt-0.21□□□□□ -2.44
RFU1Q08003 MYO1YHR023W 5787 nt-0.22□□□□□ -2.44
RFU1Q08003 ATG31YDR022C 591 nt-0.22□□□□□ -2.44
RFU1Q08003 YDL011CYDL011C 324 nt-0.23□□□□□ -2.45
RFU1Q08003 YHL041WYHL041W 450 nt-0.23□□□□□ -2.45
RFU1Q08003 YAR053WYAR053W 297 nt-0.23□□□□□ -2.45
RFU1Q08003 YNL058CYNL058C 951 nt-0.23□□□□□ -2.45
RFU1Q08003 NIP100YPL174C 2607 nt-0.23□□□□□ -2.45
RFU1Q08003 YLR285C-AYLR285C-A 171 nt-0.24□□□□□ -2.45
RFU1Q08003 NIP1YMR309C 2439 nt-0.25□□□□□ -2.45
RFU1Q08003 tN(GUU)QtN(GUU)Q 71 nt-0.25□□□□□ -2.45
RFU1Q08003 RPF1YHR088W 888 nt-0.25□□□□□ -2.45
RFU1Q08003 YLR269CYLR269C 351 nt-0.25□□□□□ -2.45
RFU1Q08003 YBL071CYBL071C 309 nt-0.25□□□□□ -2.45
RFU1Q08003 YPL229WYPL229W 621 nt-0.26□□□□□ -2.45
RFU1Q08003 COY1YKL179C 2040 nt-0.26□□□□□ -2.45
RFU1Q08003 SOV1YMR066W 2697 nt-0.27□□□□□ -2.45
RFU1Q08003 YDL185C-AYDL185C-A 228 nt-0.27□□□□□ -2.45
RFU1Q08003 YKU70YMR284W 1809 nt-0.27□□□□□ -2.45
RFU1Q08003 YOR011W-AYOR011W-A 207 nt-0.28□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 64.5 ms