Protein–RNA interactions for Protein: Q04272

VPS20, Vacuolar protein sorting-associated protein 20, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS20Q04272 tT(AGU)I2tT(AGU)I2 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)JtT(AGU)J 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)N1tT(AGU)N1 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)N2tT(AGU)N2 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)O1tT(AGU)O1 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)O2tT(AGU)O2 73 nt0.79□□□□□ -2.28
VPS20Q04272 ISF1YMR081C 1017 nt0.79□□□□□ -2.28
VPS20Q04272 PAC1YOR269W 1485 nt0.79□□□□□ -2.28
VPS20Q04272 SWF1YDR126W 1011 nt0.77□□□□□ -2.29
VPS20Q04272 YHL042WYHL042W 453 nt0.77□□□□□ -2.29
VPS20Q04272 RPS24BYIL069C 408 nt0.77□□□□□ -2.29
VPS20Q04272 YOR282WYOR282W 321 nt0.77□□□□□ -2.29
VPS20Q04272 ATG31YDR022C 591 nt0.75□□□□□ -2.29
VPS20Q04272 YHR063W-AYHR063W-A 336 nt0.75□□□□□ -2.29
VPS20Q04272 PAM16YJL104W 450 nt0.75□□□□□ -2.29
VPS20Q04272 YBL008W-AYBL008W-A 240 nt0.75□□□□□ -2.29
VPS20Q04272 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
VPS20Q04272 YLL007CYLL007C 1998 nt0.75□□□□□ -2.29
VPS20Q04272 MAM33YIL070C 801 nt0.74□□□□□ -2.29
VPS20Q04272 YJL007CYJL007C 315 nt0.74□□□□□ -2.29
VPS20Q04272 YMR031W-AYMR031W-A 327 nt0.74□□□□□ -2.29
VPS20Q04272 PTP2YOR208W 2253 nt0.74□□□□□ -2.29
VPS20Q04272 YKL063CYKL063C 504 nt0.73□□□□□ -2.29
VPS20Q04272 YML007C-AYML007C-A 111 nt0.73□□□□□ -2.29
VPS20Q04272 YDL073WYDL073W 2955 nt0.73□□□□□ -2.29
VPS20Q04272 YLR456WYLR456W 615 nt0.72□□□□□ -2.29
VPS20Q04272 RPS20YHL015W 366 nt0.71□□□□□ -2.3
VPS20Q04272 RPL38YLR325C 237 nt0.71□□□□□ -2.3
VPS20Q04272 YPR002C-AYPR002C-A 198 nt0.71□□□□□ -2.3
VPS20Q04272 INA22YIR024C 651 nt0.7□□□□□ -2.3
VPS20Q04272 BFR2YDR299W 1605 nt0.69□□□□□ -2.3
VPS20Q04272 YDR344CYDR344C 444 nt0.69□□□□□ -2.3
VPS20Q04272 YPL044CYPL044C 549 nt0.69□□□□□ -2.3
VPS20Q04272 YPL185WYPL185W 396 nt0.69□□□□□ -2.3
VPS20Q04272 YLR406C-AYLR406C-A 150 nt0.68□□□□□ -2.3
VPS20Q04272 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
VPS20Q04272 NIP100YPL174C 2607 nt0.68□□□□□ -2.3
VPS20Q04272 PMP1YCR024C-A 123 nt0.67□□□□□ -2.3
VPS20Q04272 YDR426CYDR426C 378 nt0.67□□□□□ -2.3
VPS20Q04272 YJR011CYJR011C 786 nt0.67□□□□□ -2.3
VPS20Q04272 YPL205CYPL205C 345 nt0.67□□□□□ -2.3
VPS20Q04272 ECM12YHR021W-A 456 nt0.66□□□□□ -2.3
VPS20Q04272 PCC1YKR095W-A 267 nt0.66□□□□□ -2.3
VPS20Q04272 YBR064WYBR064W 429 nt0.66□□□□□ -2.3
VPS20Q04272 Q0017Q0017 162 nt0.66□□□□□ -2.3
VPS20Q04272 OLI1Q0130 231 nt0.65□□□□□ -2.31
VPS20Q04272 YLR434CYLR434C 384 nt0.65□□□□□ -2.31
VPS20Q04272 NOP9YJL010C 2001 nt0.64□□□□□ -2.31
VPS20Q04272 NPR2YEL062W 1848 nt0.64□□□□□ -2.31
VPS20Q04272 LTE1YAL024C 4308 nt0.63□□□□□ -2.31
VPS20Q04272 YOR072W-AYOR072W-A 249 nt0.63□□□□□ -2.31
VPS20Q04272 YBR206WYBR206W 324 nt0.63□□□□□ -2.31
VPS20Q04272 YCK3YER123W 1575 nt0.62□□□□□ -2.31
VPS20Q04272 YLR202CYLR202C 327 nt0.62□□□□□ -2.31
VPS20Q04272 OST1YJL002C 1431 nt0.62□□□□□ -2.31
VPS20Q04272 SPO21YOL091W 1830 nt0.61□□□□□ -2.31
VPS20Q04272 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
VPS20Q04272 YML002WYML002W 2214 nt0.6□□□□□ -2.31
VPS20Q04272 PAA1YDR071C 576 nt0.6□□□□□ -2.31
VPS20Q04272 YPL068CYPL068C 882 nt0.6□□□□□ -2.31
VPS20Q04272 MCM10YIL150C 1716 nt0.6□□□□□ -2.31
VPS20Q04272 PRP16YKR086W 3216 nt0.6□□□□□ -2.31
VPS20Q04272 CHS6YJL099W 2241 nt0.6□□□□□ -2.31
VPS20Q04272 YJR157WYJR157W 363 nt0.59□□□□□ -2.31
VPS20Q04272 HMRA2YCR096C 360 nt0.58□□□□□ -2.32
VPS20Q04272 BSC3YLR465C 309 nt0.58□□□□□ -2.32
VPS20Q04272 YOR218CYOR218C 420 nt0.58□□□□□ -2.32
VPS20Q04272 YNL324WYNL324W 396 nt0.57□□□□□ -2.32
VPS20Q04272 YOR053WYOR053W 342 nt0.57□□□□□ -2.32
VPS20Q04272 VPS20YMR077C 666 nt0.56□□□□□ -2.32
VPS20Q04272 PRM3YPL192C 402 nt0.56□□□□□ -2.32
VPS20Q04272 ASE1YOR058C 2658 nt0.55□□□□□ -2.32
VPS20Q04272 CSN9YDR179C 489 nt0.55□□□□□ -2.32
VPS20Q04272 YER079WYER079W 633 nt0.55□□□□□ -2.32
VPS20Q04272 YFR012W-AYFR012W-A 87 nt0.55□□□□□ -2.32
VPS20Q04272 RPL26BYGR034W 384 nt0.55□□□□□ -2.32
VPS20Q04272 RPS30BYOR182C 192 nt0.54□□□□□ -2.32
VPS20Q04272 YOR011W-AYOR011W-A 207 nt0.53□□□□□ -2.32
VPS20Q04272 YOR032W-AYOR032W-A 201 nt0.53□□□□□ -2.32
VPS20Q04272 YMR160WYMR160W 2451 nt0.52□□□□□ -2.33
VPS20Q04272 YIL134C-AYIL134C-A 204 nt0.52□□□□□ -2.33
VPS20Q04272 YBR285WYBR285W 435 nt0.52□□□□□ -2.33
VPS20Q04272 AGA2YGL032C 264 nt0.51□□□□□ -2.33
VPS20Q04272 YER137W-AYER137W-A 306 nt0.49□□□□□ -2.33
VPS20Q04272 YNL211CYNL211C 261 nt0.49□□□□□ -2.33
VPS20Q04272 YOR029WYOR029W 336 nt0.49□□□□□ -2.33
VPS20Q04272 UBP3YER151C 2739 nt0.48□□□□□ -2.33
VPS20Q04272 YAR029WYAR029W 225 nt0.48□□□□□ -2.33
VPS20Q04272 YLR264C-AYLR264C-A 117 nt0.48□□□□□ -2.33
VPS20Q04272 YLR334CYLR334C 381 nt0.48□□□□□ -2.33
VPS20Q04272 YJL127W-AYJL127W-A 117 nt0.47□□□□□ -2.33
VPS20Q04272 RPS25BYLR333C 327 nt0.47□□□□□ -2.33
VPS20Q04272 SEC8YPR055W 3198 nt0.47□□□□□ -2.33
VPS20Q04272 FYV10YIL097W 1551 nt0.47□□□□□ -2.33
VPS20Q04272 STF2YGR008C 255 nt0.46□□□□□ -2.34
VPS20Q04272 YHR138CYHR138C 345 nt0.46□□□□□ -2.34
VPS20Q04272 YOR121CYOR121C 306 nt0.46□□□□□ -2.34
VPS20Q04272 LEE1YPL054W 906 nt0.46□□□□□ -2.34
VPS20Q04272 YMR001C-AYMR001C-A 231 nt0.45□□□□□ -2.34
VPS20Q04272 YOR293C-AYOR293C-A 150 nt0.45□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 105.6 ms