Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.64■□□□□ 0.41
LSM6P62312 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM6P62312 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM6P62312 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM6P62312 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.64■□□□□ 0.41
LSM6P62312 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.64■□□□□ 0.41
LSM6P62312 RAP2CP1-201ENST00000605103 478 ntBASIC17.64■□□□□ 0.41
LSM6P62312 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.64■□□□□ 0.41
LSM6P62312 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM6P62312 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LSM6P62312 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LSM6P62312 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.63■□□□□ 0.41
LSM6P62312 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM6P62312 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM6P62312 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM6P62312 AF201337.1-201ENST00000520239 748 ntBASIC17.63■□□□□ 0.41
LSM6P62312 C2orf69P4-201ENST00000565394 541 ntBASIC17.63■□□□□ 0.41
LSM6P62312 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.63■□□□□ 0.41
LSM6P62312 AL031963.3-201ENST00000606441 850 ntBASIC17.63■□□□□ 0.41
LSM6P62312 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM6P62312 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 KRT8P20-201ENST00000423953 1409 ntBASIC17.63■□□□□ 0.41
LSM6P62312 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM6P62312 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.63■□□□□ 0.41
LSM6P62312 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
LSM6P62312 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.62■□□□□ 0.41
LSM6P62312 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LSM6P62312 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.62■□□□□ 0.41
LSM6P62312 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
LSM6P62312 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LSM6P62312 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LSM6P62312 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 KRT17P1-201ENST00000399211 1546 ntBASIC17.62■□□□□ 0.41
LSM6P62312 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM6P62312 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.61■□□□□ 0.41
LSM6P62312 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LSM6P62312 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM6P62312 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.61■□□□□ 0.41
LSM6P62312 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.61■□□□□ 0.41
LSM6P62312 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
LSM6P62312 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 LSM12P1-201ENST00000411836 588 ntBASIC17.61■□□□□ 0.41
LSM6P62312 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.61■□□□□ 0.41
LSM6P62312 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.61■□□□□ 0.41
LSM6P62312 AC105036.2-201ENST00000569468 176 ntBASIC17.61■□□□□ 0.41
LSM6P62312 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM6P62312 AL050303.2-201ENST00000619798 666 ntBASIC17.61■□□□□ 0.41
LSM6P62312 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM6P62312 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM6P62312 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.61■□□□□ 0.41
LSM6P62312 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 MKRN4P-201ENST00000444706 1521 ntBASIC17.61■□□□□ 0.41
LSM6P62312 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LSM6P62312 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM6P62312 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 HLA-G-202ENST00000376815 851 ntBASIC17.6■□□□□ 0.41
LSM6P62312 HLA-G-203ENST00000376818 1127 ntBASIC17.6■□□□□ 0.41
LSM6P62312 MIR663A-201ENST00000385250 93 ntBASIC17.6■□□□□ 0.41
LSM6P62312 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.6■□□□□ 0.41
LSM6P62312 AC023632.3-201ENST00000521633 145 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms