Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLRN1P58418 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLRN1P58418 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 MIR663A-201ENST00000385250 93 ntBASIC17.93■□□□□ 0.46
CLRN1P58418 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.93■□□□□ 0.46
CLRN1P58418 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.93■□□□□ 0.46
CLRN1P58418 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.93■□□□□ 0.46
CLRN1P58418 AL589743.5-201ENST00000616611 1050 ntBASIC17.93■□□□□ 0.46
CLRN1P58418 AC099778.1-201ENST00000568593 1911 ntBASIC17.93■□□□□ 0.46
CLRN1P58418 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
CLRN1P58418 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.93■□□□□ 0.46
CLRN1P58418 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.93■□□□□ 0.46
CLRN1P58418 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.93■□□□□ 0.46
CLRN1P58418 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLRN1P58418 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.92■□□□□ 0.46
CLRN1P58418 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 AL512625.2-201ENST00000417533 625 ntBASIC17.92■□□□□ 0.46
CLRN1P58418 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 AC093787.1-201ENST00000450396 207 ntBASIC17.92■□□□□ 0.46
CLRN1P58418 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.92■□□□□ 0.46
CLRN1P58418 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.92■□□□□ 0.46
CLRN1P58418 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLRN1P58418 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLRN1P58418 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.92■□□□□ 0.46
CLRN1P58418 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.91■□□□□ 0.46
CLRN1P58418 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.91■□□□□ 0.46
CLRN1P58418 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLRN1P58418 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.91■□□□□ 0.46
CLRN1P58418 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.91■□□□□ 0.46
CLRN1P58418 AC133552.2-202ENST00000575694 574 ntBASIC17.91■□□□□ 0.46
CLRN1P58418 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.91■□□□□ 0.46
CLRN1P58418 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLRN1P58418 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.91■□□□□ 0.46
CLRN1P58418 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CLRN1P58418 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLRN1P58418 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.9■□□□□ 0.46
CLRN1P58418 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLRN1P58418 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
CLRN1P58418 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 PCDHAC2-203ENST00000615316 3011 ntBASIC17.9■□□□□ 0.46
CLRN1P58418 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 AF201337.1-201ENST00000520239 748 ntBASIC17.9■□□□□ 0.46
CLRN1P58418 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLRN1P58418 AC105036.2-201ENST00000569468 176 ntBASIC17.9■□□□□ 0.46
CLRN1P58418 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLRN1P58418 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.9■□□□□ 0.46
CLRN1P58418 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLRN1P58418 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.9■□□□□ 0.46
CLRN1P58418 AC112907.3-201ENST00000577781 2400 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms