Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB38P57729 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB38P57729 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB38P57729 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB38P57729 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.89■□□□□ 0.62
RAB38P57729 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB38P57729 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB38P57729 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB38P57729 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB38P57729 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB38P57729 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.89■□□□□ 0.61
RAB38P57729 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.89■□□□□ 0.61
RAB38P57729 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB38P57729 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB38P57729 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB38P57729 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB38P57729 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB38P57729 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB38P57729 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAB38P57729 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB38P57729 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB38P57729 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAB38P57729 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB38P57729 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB38P57729 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RAB38P57729 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB38P57729 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 CD99P1-205ENST00000527459 561 ntBASIC18.88■□□□□ 0.61
RAB38P57729 UNC93B5-201ENST00000530315 699 ntBASIC18.88■□□□□ 0.61
RAB38P57729 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB38P57729 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB38P57729 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB38P57729 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB38P57729 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB38P57729 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB38P57729 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB38P57729 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB38P57729 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
RAB38P57729 AC006557.6-201ENST00000623071 864 ntBASIC18.87■□□□□ 0.61
RAB38P57729 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB38P57729 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAB38P57729 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 BX119927.1-201ENST00000636596 1552 ntBASIC18.86■□□□□ 0.61
RAB38P57729 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 KRT16P6-202ENST00000425692 1426 ntBASIC18.86■□□□□ 0.61
RAB38P57729 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB38P57729 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB38P57729 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB38P57729 SOX15-203ENST00000570788 1093 ntBASIC18.86■□□□□ 0.61
RAB38P57729 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB38P57729 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RAB38P57729 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB38P57729 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB38P57729 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB38P57729 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB38P57729 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAB38P57729 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB38P57729 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB38P57729 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB38P57729 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB38P57729 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB38P57729 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB38P57729 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms