Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC26.32■■□□□ 1.8
RIPK4P57078 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIPK4P57078 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RIPK4P57078 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RIPK4P57078 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIPK4P57078 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.32■■□□□ 1.8
RIPK4P57078 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.32■■□□□ 1.8
RIPK4P57078 HLA-G-202ENST00000376815 851 ntBASIC26.32■■□□□ 1.8
RIPK4P57078 HLA-G-203ENST00000376818 1127 ntBASIC26.32■■□□□ 1.8
RIPK4P57078 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.32■■□□□ 1.8
RIPK4P57078 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIPK4P57078 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIPK4P57078 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.32■■□□□ 1.8
RIPK4P57078 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.32■■□□□ 1.8
RIPK4P57078 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RIPK4P57078 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIPK4P57078 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
RIPK4P57078 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.31■■□□□ 1.8
RIPK4P57078 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 AL512408.1-201ENST00000569378 2000 ntBASIC26.31■■□□□ 1.8
RIPK4P57078 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RIPK4P57078 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 KRT17P3-201ENST00000420566 1262 ntBASIC26.31■■□□□ 1.8
RIPK4P57078 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.31■■□□□ 1.8
RIPK4P57078 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.31■■□□□ 1.8
RIPK4P57078 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RIPK4P57078 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.31■■□□□ 1.8
RIPK4P57078 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RIPK4P57078 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIPK4P57078 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC26.3■■□□□ 1.8
RIPK4P57078 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RIPK4P57078 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.3■■□□□ 1.8
RIPK4P57078 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC26.3■■□□□ 1.8
RIPK4P57078 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
RIPK4P57078 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RIPK4P57078 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 AC124283.5-201ENST00000624661 1809 ntBASIC26.3■■□□□ 1.8
RIPK4P57078 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIPK4P57078 GABARAPL3-202ENST00000624044 1851 ntBASIC26.3■■□□□ 1.8
RIPK4P57078 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RIPK4P57078 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.29■■□□□ 1.8
RIPK4P57078 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.29■■□□□ 1.8
RIPK4P57078 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.29■■□□□ 1.8
RIPK4P57078 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.29■■□□□ 1.8
RIPK4P57078 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
RIPK4P57078 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIPK4P57078 LINC01006-201ENST00000333319 2292 ntBASIC26.28■■□□□ 1.8
RIPK4P57078 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIPK4P57078 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RIPK4P57078 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RIPK4P57078 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RIPK4P57078 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
RIPK4P57078 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
RIPK4P57078 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RIPK4P57078 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.28■■□□□ 1.8
RIPK4P57078 AC069544.1-201ENST00000609399 999 ntBASIC26.28■■□□□ 1.8
RIPK4P57078 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.28■■□□□ 1.8
RIPK4P57078 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
RIPK4P57078 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RIPK4P57078 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIPK4P57078 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26.28■■□□□ 1.8
RIPK4P57078 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC26.28■■□□□ 1.8
RIPK4P57078 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RIPK4P57078 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.28■■□□□ 1.8
RIPK4P57078 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIPK4P57078 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RIPK4P57078 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.27■■□□□ 1.8
RIPK4P57078 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 RPS2P52-201ENST00000469610 820 ntBASIC26.27■■□□□ 1.8
RIPK4P57078 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.27■■□□□ 1.8
RIPK4P57078 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
RIPK4P57078 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.27■■□□□ 1.8
RIPK4P57078 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.27■■□□□ 1.8
RIPK4P57078 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms