Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN18P56856 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CLDN18P56856 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN18P56856 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN18P56856 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN18P56856 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CLDN18P56856 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN18P56856 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN18P56856 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN18P56856 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN18P56856 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN18P56856 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN18P56856 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CLDN18P56856 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 AC124283.5-201ENST00000624661 1809 ntBASIC17.95■□□□□ 0.46
CLDN18P56856 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLDN18P56856 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN18P56856 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN18P56856 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CLDN18P56856 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN18P56856 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN18P56856 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN18P56856 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN18P56856 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN18P56856 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN18P56856 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN18P56856 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN18P56856 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN18P56856 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN18P56856 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN18P56856 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.93■□□□□ 0.46
CLDN18P56856 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN18P56856 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN18P56856 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN18P56856 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN18P56856 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN18P56856 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN18P56856 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN18P56856 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN18P56856 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN18P56856 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN18P56856 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN18P56856 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN18P56856 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN18P56856 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN18P56856 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN18P56856 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN18P56856 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN18P56856 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.92■□□□□ 0.46
CLDN18P56856 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.92■□□□□ 0.46
CLDN18P56856 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLDN18P56856 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN18P56856 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 AL121829.2-201ENST00000620908 328 ntBASIC17.92■□□□□ 0.46
CLDN18P56856 FAM197Y4-202ENST00000622692 608 ntBASIC17.92■□□□□ 0.46
CLDN18P56856 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN18P56856 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN18P56856 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN18P56856 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms