Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA4P54764 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA4P54764 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHA4P54764 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA4P54764 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
EPHA4P54764 KRASP1-201ENST00000407852 552 ntBASIC19.38■□□□□ 0.69
EPHA4P54764 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA4P54764 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHA4P54764 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA4P54764 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA4P54764 PTBP1P-201ENST00000554374 1601 ntBASIC19.38■□□□□ 0.69
EPHA4P54764 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHA4P54764 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
EPHA4P54764 AC006128.1-201ENST00000624704 1661 ntBASIC19.38■□□□□ 0.69
EPHA4P54764 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA4P54764 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EPHA4P54764 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EPHA4P54764 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
EPHA4P54764 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
EPHA4P54764 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 KRT8P20-201ENST00000423953 1409 ntBASIC19.37■□□□□ 0.69
EPHA4P54764 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
EPHA4P54764 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 AC012618.2-201ENST00000428058 849 ntBASIC19.37■□□□□ 0.69
EPHA4P54764 AL031963.3-201ENST00000606441 850 ntBASIC19.37■□□□□ 0.69
EPHA4P54764 AL121906.2-201ENST00000621597 723 ntBASIC19.37■□□□□ 0.69
EPHA4P54764 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EPHA4P54764 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
EPHA4P54764 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHA4P54764 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EPHA4P54764 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHA4P54764 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.36■□□□□ 0.69
EPHA4P54764 AL135905.2-201ENST00000584934 1404 ntBASIC19.36■□□□□ 0.69
EPHA4P54764 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHA4P54764 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHA4P54764 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
EPHA4P54764 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EPHA4P54764 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.36■□□□□ 0.69
EPHA4P54764 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.36■□□□□ 0.69
EPHA4P54764 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHA4P54764 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHA4P54764 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHA4P54764 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.35■□□□□ 0.69
EPHA4P54764 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
EPHA4P54764 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.35■□□□□ 0.69
EPHA4P54764 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.35■□□□□ 0.69
EPHA4P54764 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.35■□□□□ 0.69
EPHA4P54764 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.35■□□□□ 0.69
EPHA4P54764 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.35■□□□□ 0.69
EPHA4P54764 Z99916.2-201ENST00000604037 246 ntBASIC19.35■□□□□ 0.69
EPHA4P54764 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.35■□□□□ 0.69
EPHA4P54764 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
EPHA4P54764 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.35■□□□□ 0.69
EPHA4P54764 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.35■□□□□ 0.69
EPHA4P54764 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EPHA4P54764 AF106564.1-201ENST00000607058 2553 ntBASIC19.35■□□□□ 0.69
EPHA4P54764 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.34■□□□□ 0.69
EPHA4P54764 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.34■□□□□ 0.69
EPHA4P54764 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
EPHA4P54764 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
EPHA4P54764 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.34■□□□□ 0.69
EPHA4P54764 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
EPHA4P54764 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
EPHA4P54764 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.34■□□□□ 0.69
EPHA4P54764 MIR4497-201ENST00000583208 89 ntBASIC19.34■□□□□ 0.69
EPHA4P54764 AP001412.1-201ENST00000608405 714 ntBASIC19.34■□□□□ 0.69
EPHA4P54764 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.34■□□□□ 0.69
EPHA4P54764 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
EPHA4P54764 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.34■□□□□ 0.69
EPHA4P54764 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA4P54764 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms