Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 MYCNOS-205ENST00000641950 531 ntBASIC18.35■□□□□ 0.53
SLC9A3P48764 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC9A3P48764 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC9A3P48764 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SLC9A3P48764 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC9A3P48764 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC9A3P48764 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC9A3P48764 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC9A3P48764 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC9A3P48764 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 PGM5P4-201ENST00000421970 445 ntBASIC18.34■□□□□ 0.53
SLC9A3P48764 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC9A3P48764 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 UBE2DNL-204ENST00000602536 740 ntBASIC18.34■□□□□ 0.53
SLC9A3P48764 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SLC9A3P48764 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC9A3P48764 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC9A3P48764 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC9A3P48764 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLC9A3P48764 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC9A3P48764 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC9A3P48764 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.33■□□□□ 0.53
SLC9A3P48764 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC9A3P48764 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC9A3P48764 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC9A3P48764 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLC9A3P48764 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC9A3P48764 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC9A3P48764 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC9A3P48764 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC9A3P48764 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC9A3P48764 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC9A3P48764 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC9A3P48764 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC9A3P48764 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC9A3P48764 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC9A3P48764 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SLC9A3P48764 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC9A3P48764 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SLC9A3P48764 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC9A3P48764 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SLC9A3P48764 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC9A3P48764 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC9A3P48764 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC9A3P48764 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC9A3P48764 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC9A3P48764 KRT18P61-201ENST00000585825 1298 ntBASIC18.32■□□□□ 0.52
SLC9A3P48764 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.32■□□□□ 0.52
SLC9A3P48764 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC9A3P48764 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SLC9A3P48764 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC9A3P48764 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC9A3P48764 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC9A3P48764 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC9A3P48764 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC9A3P48764 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC9A3P48764 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC9A3P48764 TCF3P1-201ENST00000423021 1937 ntBASIC18.31■□□□□ 0.52
SLC9A3P48764 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC9A3P48764 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC9A3P48764 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC9A3P48764 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC9A3P48764 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC9A3P48764 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC9A3P48764 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC9A3P48764 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC9A3P48764 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC9A3P48764 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC9A3P48764 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC9A3P48764 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC9A3P48764 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC9A3P48764 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms