Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.4■□□□□ 0.7
SLC6A12P48065 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SLC6A12P48065 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SLC6A12P48065 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A12P48065 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A12P48065 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SLC6A12P48065 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A12P48065 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A12P48065 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC6A12P48065 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A12P48065 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SLC6A12P48065 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC6A12P48065 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A12P48065 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC6A12P48065 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A12P48065 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A12P48065 GPX1P1-201ENST00000388829 606 ntBASIC19.39■□□□□ 0.69
SLC6A12P48065 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A12P48065 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A12P48065 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A12P48065 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SLC6A12P48065 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A12P48065 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLC6A12P48065 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A12P48065 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A12P48065 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A12P48065 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.38■□□□□ 0.69
SLC6A12P48065 TSPY6P-201ENST00000448518 926 ntBASIC19.38■□□□□ 0.69
SLC6A12P48065 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A12P48065 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A12P48065 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A12P48065 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A12P48065 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A12P48065 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.38■□□□□ 0.69
SLC6A12P48065 AC092118.2-201ENST00000613495 667 ntBASIC19.38■□□□□ 0.69
SLC6A12P48065 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A12P48065 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A12P48065 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A12P48065 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 TMEM179-206ENST00000616017 1645 ntBASIC19.37■□□□□ 0.69
SLC6A12P48065 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A12P48065 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC6A12P48065 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC6A12P48065 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC6A12P48065 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC6A12P48065 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.37■□□□□ 0.69
SLC6A12P48065 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A12P48065 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A12P48065 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 KRT16P6-202ENST00000425692 1426 ntBASIC19.36■□□□□ 0.69
SLC6A12P48065 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A12P48065 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC6A12P48065 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC6A12P48065 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 HLA-G-202ENST00000376815 851 ntBASIC19.36■□□□□ 0.69
SLC6A12P48065 HLA-G-203ENST00000376818 1127 ntBASIC19.36■□□□□ 0.69
SLC6A12P48065 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A12P48065 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.36■□□□□ 0.69
SLC6A12P48065 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms