Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YOR376WYOR376W 369 nt1.32□□□□□ -2.2
SSN8P47821 NUP188YML103C 4968 nt1.31□□□□□ -2.2
SSN8P47821 COG4YPR105C 2586 nt1.31□□□□□ -2.2
SSN8P47821 SPT21YMR179W 2277 nt1.31□□□□□ -2.2
SSN8P47821 YER181CYER181C 324 nt1.31□□□□□ -2.2
SSN8P47821 RPL34BYIL052C 366 nt1.31□□□□□ -2.2
SSN8P47821 YMR290W-AYMR290W-A 348 nt1.31□□□□□ -2.2
SSN8P47821 SEC5YDR166C 2916 nt1.31□□□□□ -2.2
SSN8P47821 RAD9YDR217C 3930 nt1.3□□□□□ -2.2
SSN8P47821 YDL211CYDL211C 1119 nt1.3□□□□□ -2.2
SSN8P47821 YIL020C-AYIL020C-A 339 nt1.3□□□□□ -2.2
SSN8P47821 CAT8YMR280C 4302 nt1.3□□□□□ -2.2
SSN8P47821 EST2YLR318W 2655 nt1.3□□□□□ -2.2
SSN8P47821 RSM22YKL155C 1887 nt1.29□□□□□ -2.2
SSN8P47821 YBR206WYBR206W 324 nt1.29□□□□□ -2.2
SSN8P47821 LCD1YDR499W 2244 nt1.29□□□□□ -2.2
SSN8P47821 VPS54YDR027C 2670 nt1.29□□□□□ -2.2
SSN8P47821 MSN5YDR335W 3675 nt1.28□□□□□ -2.2
SSN8P47821 YJL120WYJL120W 324 nt1.28□□□□□ -2.2
SSN8P47821 YOR015WYOR015W 360 nt1.28□□□□□ -2.2
SSN8P47821 SPO21YOL091W 1830 nt1.28□□□□□ -2.2
SSN8P47821 SLI15YBR156C 2097 nt1.28□□□□□ -2.2
SSN8P47821 CDC39YCR093W 6327 nt1.28□□□□□ -2.21
SSN8P47821 RAD61YDR014W 1944 nt1.27□□□□□ -2.21
SSN8P47821 YDR521WYDR521W 336 nt1.27□□□□□ -2.21
SSN8P47821 YGR069WYGR069W 336 nt1.27□□□□□ -2.21
SSN8P47821 NUP192YJL039C 5052 nt1.27□□□□□ -2.21
SSN8P47821 COG8YML071C 1824 nt1.26□□□□□ -2.21
SSN8P47821 YJL015CYJL015C 285 nt1.26□□□□□ -2.21
SSN8P47821 PFD1YJL179W 330 nt1.26□□□□□ -2.21
SSN8P47821 VIK1YPL253C 1944 nt1.26□□□□□ -2.21
SSN8P47821 KIP1YBL063W 3336 nt1.25□□□□□ -2.21
SSN8P47821 YEL020C-BYEL020C-B 198 nt1.25□□□□□ -2.21
SSN8P47821 RPS25BYLR333C 327 nt1.25□□□□□ -2.21
SSN8P47821 YML099W-AYML099W-A 330 nt1.25□□□□□ -2.21
SSN8P47821 PKH2YOL100W 3246 nt1.25□□□□□ -2.21
SSN8P47821 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
SSN8P47821 YLR422WYLR422W 5799 nt1.24□□□□□ -2.21
SSN8P47821 YHL042WYHL042W 453 nt1.24□□□□□ -2.21
SSN8P47821 YOR161W-BYOR161W-B 261 nt1.24□□□□□ -2.21
SSN8P47821 IFH1YLR223C 3258 nt1.23□□□□□ -2.21
SSN8P47821 YLL007CYLL007C 1998 nt1.23□□□□□ -2.21
SSN8P47821 ALY2YJL084C 3141 nt1.23□□□□□ -2.21
SSN8P47821 APL3YBL037W 3078 nt1.23□□□□□ -2.21
SSN8P47821 YDL206WYDL206W 2289 nt1.22□□□□□ -2.21
SSN8P47821 SET3YKR029C 2256 nt1.22□□□□□ -2.21
SSN8P47821 CSE2YNR010W 450 nt1.22□□□□□ -2.21
SSN8P47821 AZF1YOR113W 2745 nt1.22□□□□□ -2.21
SSN8P47821 CUL3YGR003W 2235 nt1.21□□□□□ -2.21
SSN8P47821 PIP2YOR363C 2991 nt1.21□□□□□ -2.22
SSN8P47821 CDC31YOR257W 486 nt1.21□□□□□ -2.22
SSN8P47821 YPL152W-AYPL152W-A 99 nt1.21□□□□□ -2.22
SSN8P47821 YBR064WYBR064W 429 nt1.21□□□□□ -2.22
SSN8P47821 YBR221W-AYBR221W-A 105 nt1.21□□□□□ -2.22
SSN8P47821 FIG4YNL325C 2640 nt1.2□□□□□ -2.22
SSN8P47821 YIR044CYIR044C 186 nt1.2□□□□□ -2.22
SSN8P47821 YLR120W-AYLR120W-A 102 nt1.2□□□□□ -2.22
SSN8P47821 STO1YMR125W 2586 nt1.2□□□□□ -2.22
SSN8P47821 CLU1YMR012W 3834 nt1.2□□□□□ -2.22
SSN8P47821 SWI4YER111C 3282 nt1.19□□□□□ -2.22
SSN8P47821 RRT15YLR162W-A 189 nt1.19□□□□□ -2.22
SSN8P47821 YMR172C-AYMR172C-A 384 nt1.19□□□□□ -2.22
SSN8P47821 YOR011W-AYOR011W-A 207 nt1.19□□□□□ -2.22
SSN8P47821 YLL054CYLL054C 2532 nt1.19□□□□□ -2.22
SSN8P47821 GPG1YGL121C 381 nt1.18□□□□□ -2.22
SSN8P47821 YNL028WYNL028W 318 nt1.18□□□□□ -2.22
SSN8P47821 YAR009CYAR009C 3591 nt1.17□□□□□ -2.22
SSN8P47821 HMRA2YCR096C 360 nt1.17□□□□□ -2.22
SSN8P47821 RPS27BYHR021C 249 nt1.17□□□□□ -2.22
SSN8P47821 APL1YJR005W 2103 nt1.17□□□□□ -2.22
SSN8P47821 STB6YKL072W 2301 nt1.16□□□□□ -2.22
SSN8P47821 CDC25YLR310C 4770 nt1.16□□□□□ -2.22
SSN8P47821 PTP2YOR208W 2253 nt1.16□□□□□ -2.22
SSN8P47821 YCR022CYCR022C 345 nt1.16□□□□□ -2.22
SSN8P47821 ECM12YHR021W-A 456 nt1.16□□□□□ -2.22
SSN8P47821 YLL020CYLL020C 306 nt1.16□□□□□ -2.22
SSN8P47821 IES4YOR189W 351 nt1.16□□□□□ -2.22
SSN8P47821 YOR282WYOR282W 321 nt1.16□□□□□ -2.22
SSN8P47821 EAF1YDR359C 2949 nt1.16□□□□□ -2.22
SSN8P47821 PDE2YOR360C 1581 nt1.16□□□□□ -2.22
SSN8P47821 MMS4YBR098W 2076 nt1.16□□□□□ -2.22
SSN8P47821 MSH3YCR092C 3057 nt1.15□□□□□ -2.22
SSN8P47821 snR74snR74 88 nt1.15□□□□□ -2.23
SSN8P47821 YGL052WYGL052W 306 nt1.15□□□□□ -2.23
SSN8P47821 YJL197C-AYJL197C-A 282 nt1.15□□□□□ -2.23
SSN8P47821 YMR321CYMR321C 318 nt1.15□□□□□ -2.23
SSN8P47821 LAA1YJL207C 6045 nt1.14□□□□□ -2.23
SSN8P47821 YGL041CYGL041C 204 nt1.14□□□□□ -2.23
SSN8P47821 YOR008C-AYOR008C-A 225 nt1.14□□□□□ -2.23
SSN8P47821 SEC3YER008C 4011 nt1.13□□□□□ -2.23
SSN8P47821 PAN2YGL094C 3348 nt1.12□□□□□ -2.23
SSN8P47821 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
SSN8P47821 SGF11YPL047W 300 nt1.12□□□□□ -2.23
SSN8P47821 GEA2YEL022W 4380 nt1.12□□□□□ -2.23
SSN8P47821 MCM10YIL150C 1716 nt1.12□□□□□ -2.23
SSN8P47821 tH(GUG)E1tH(GUG)E1 72 nt1.11□□□□□ -2.23
SSN8P47821 tH(GUG)E2tH(GUG)E2 72 nt1.11□□□□□ -2.23
SSN8P47821 tH(GUG)G1tH(GUG)G1 72 nt1.11□□□□□ -2.23
SSN8P47821 tH(GUG)G2tH(GUG)G2 72 nt1.11□□□□□ -2.23
SSN8P47821 tH(GUG)HtH(GUG)H 72 nt1.11□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 46.6 ms