Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 PFD1YJL179W 330 nt1.15□□□□□ -2.23
LCB3P47013 DBP6YNR038W 1890 nt1.15□□□□□ -2.23
LCB3P47013 MMS4YBR098W 2076 nt1.15□□□□□ -2.23
LCB3P47013 STE5YDR103W 2754 nt1.15□□□□□ -2.23
LCB3P47013 SWI4YER111C 3282 nt1.15□□□□□ -2.23
LCB3P47013 MSN5YDR335W 3675 nt1.15□□□□□ -2.23
LCB3P47013 PTP2YOR208W 2253 nt1.14□□□□□ -2.23
LCB3P47013 YGL149WYGL149W 306 nt1.14□□□□□ -2.23
LCB3P47013 tQ(UUG)E2tQ(UUG)E2 72 nt1.14□□□□□ -2.23
LCB3P47013 NUP188YML103C 4968 nt1.13□□□□□ -2.23
LCB3P47013 YNL146WYNL146W 303 nt1.13□□□□□ -2.23
LCB3P47013 YLL007CYLL007C 1998 nt1.13□□□□□ -2.23
LCB3P47013 YLR422WYLR422W 5799 nt1.13□□□□□ -2.23
LCB3P47013 APL3YBL037W 3078 nt1.12□□□□□ -2.23
LCB3P47013 SSS1YDR086C 243 nt1.12□□□□□ -2.23
LCB3P47013 YDR521WYDR521W 336 nt1.12□□□□□ -2.23
LCB3P47013 GPG1YGL121C 381 nt1.12□□□□□ -2.23
LCB3P47013 PBY1YBR094W 2262 nt1.12□□□□□ -2.23
LCB3P47013 RSM22YKL155C 1887 nt1.12□□□□□ -2.23
LCB3P47013 SLD3YGL113W 2007 nt1.11□□□□□ -2.23
LCB3P47013 HMRA2YCR096C 360 nt1.11□□□□□ -2.23
LCB3P47013 YDR344CYDR344C 444 nt1.11□□□□□ -2.23
LCB3P47013 YIL115W-AYIL115W-A 372 nt1.11□□□□□ -2.23
LCB3P47013 YMR193C-AYMR193C-A 387 nt1.11□□□□□ -2.23
LCB3P47013 YDL206WYDL206W 2289 nt1.11□□□□□ -2.23
LCB3P47013 PAN2YGL094C 3348 nt1.11□□□□□ -2.23
LCB3P47013 SPO75YLL005C 2607 nt1.11□□□□□ -2.23
LCB3P47013 FIG4YNL325C 2640 nt1.11□□□□□ -2.23
LCB3P47013 MDS3YGL197W 4464 nt1.11□□□□□ -2.23
LCB3P47013 SET3YKR029C 2256 nt1.1□□□□□ -2.23
LCB3P47013 CDC36YDL165W 576 nt1.1□□□□□ -2.23
LCB3P47013 YMR031W-AYMR031W-A 327 nt1.1□□□□□ -2.23
LCB3P47013 CDC31YOR257W 486 nt1.1□□□□□ -2.23
LCB3P47013 LAA1YJL207C 6045 nt1.1□□□□□ -2.23
LCB3P47013 NUP145YGL092W 3954 nt1.1□□□□□ -2.23
LCB3P47013 PDE2YOR360C 1581 nt1.09□□□□□ -2.23
LCB3P47013 YIL032CYIL032C 357 nt1.09□□□□□ -2.23
LCB3P47013 RRT15YLR162W-A 189 nt1.09□□□□□ -2.23
LCB3P47013 STO1YMR125W 2586 nt1.09□□□□□ -2.24
LCB3P47013 RAD9YDR217C 3930 nt1.08□□□□□ -2.24
LCB3P47013 YIL020C-AYIL020C-A 339 nt1.08□□□□□ -2.24
LCB3P47013 YJL120WYJL120W 324 nt1.08□□□□□ -2.24
LCB3P47013 CLU1YMR012W 3834 nt1.08□□□□□ -2.24
LCB3P47013 YBR206WYBR206W 324 nt1.08□□□□□ -2.24
LCB3P47013 YBR221W-AYBR221W-A 105 nt1.08□□□□□ -2.24
LCB3P47013 snR60snR60 104 nt1.07□□□□□ -2.24
LCB3P47013 YLL020CYLL020C 306 nt1.07□□□□□ -2.24
LCB3P47013 RPS25BYLR333C 327 nt1.07□□□□□ -2.24
LCB3P47013 CDC25YLR310C 4770 nt1.07□□□□□ -2.24
LCB3P47013 YAR009CYAR009C 3591 nt1.07□□□□□ -2.24
LCB3P47013 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
LCB3P47013 SEC3YER008C 4011 nt1.06□□□□□ -2.24
LCB3P47013 YHL042WYHL042W 453 nt1.06□□□□□ -2.24
LCB3P47013 INA22YIR024C 651 nt1.06□□□□□ -2.24
LCB3P47013 YMR321CYMR321C 318 nt1.06□□□□□ -2.24
LCB3P47013 NUP192YJL039C 5052 nt1.06□□□□□ -2.24
LCB3P47013 AHC1YOR023C 1701 nt1.06□□□□□ -2.24
LCB3P47013 ALG13YGL047W 609 nt1.05□□□□□ -2.24
LCB3P47013 YBR200W-AYBR200W-A 165 nt1.05□□□□□ -2.24
LCB3P47013 COG8YML071C 1824 nt1.05□□□□□ -2.24
LCB3P47013 SPO21YOL091W 1830 nt1.05□□□□□ -2.24
LCB3P47013 VIK1YPL253C 1944 nt1.05□□□□□ -2.24
LCB3P47013 EAF1YDR359C 2949 nt1.05□□□□□ -2.24
LCB3P47013 MSH3YCR092C 3057 nt1.04□□□□□ -2.24
LCB3P47013 snR65snR65 100 nt1.04□□□□□ -2.24
LCB3P47013 STB6YKL072W 2301 nt1.03□□□□□ -2.24
LCB3P47013 YOR011W-AYOR011W-A 207 nt1.02□□□□□ -2.25
LCB3P47013 ROM2YLR371W 4071 nt1.02□□□□□ -2.25
LCB3P47013 WAR1YML076C 2835 nt1.02□□□□□ -2.25
LCB3P47013 RPS27BYHR021C 249 nt1.01□□□□□ -2.25
LCB3P47013 CSE2YNR010W 450 nt1.01□□□□□ -2.25
LCB3P47013 YBR064WYBR064W 429 nt1.01□□□□□ -2.25
LCB3P47013 NUP157YER105C 4176 nt1□□□□□ -2.25
LCB3P47013 YNL284C-BYNL284C-B 5268 nt1□□□□□ -2.25
LCB3P47013 YPR010C-AYPR010C-A 219 nt1□□□□□ -2.25
LCB3P47013 NST1YNL091W 3723 nt1□□□□□ -2.25
LCB3P47013 YNL028WYNL028W 318 nt0.99□□□□□ -2.25
LCB3P47013 YOR218CYOR218C 420 nt0.99□□□□□ -2.25
LCB3P47013 RAD61YDR014W 1944 nt0.98□□□□□ -2.25
LCB3P47013 tH(GUG)E1tH(GUG)E1 72 nt0.98□□□□□ -2.25
LCB3P47013 tH(GUG)E2tH(GUG)E2 72 nt0.98□□□□□ -2.25
LCB3P47013 tH(GUG)G1tH(GUG)G1 72 nt0.98□□□□□ -2.25
LCB3P47013 tH(GUG)G2tH(GUG)G2 72 nt0.98□□□□□ -2.25
LCB3P47013 tH(GUG)HtH(GUG)H 72 nt0.98□□□□□ -2.25
LCB3P47013 tH(GUG)KtH(GUG)K 72 nt0.98□□□□□ -2.25
LCB3P47013 tH(GUG)MtH(GUG)M 72 nt0.98□□□□□ -2.25
LCB3P47013 YNL277W-AYNL277W-A 189 nt0.98□□□□□ -2.25
LCB3P47013 APL1YJR005W 2103 nt0.97□□□□□ -2.25
LCB3P47013 YOR231C-AYOR231C-A 201 nt0.97□□□□□ -2.25
LCB3P47013 RPL33BYOR234C 324 nt0.97□□□□□ -2.25
LCB3P47013 YGR069WYGR069W 336 nt0.96□□□□□ -2.26
LCB3P47013 YOR008C-AYOR008C-A 225 nt0.96□□□□□ -2.26
LCB3P47013 IES4YOR189W 351 nt0.96□□□□□ -2.26
LCB3P47013 SMC1YFL008W 3678 nt0.96□□□□□ -2.26
LCB3P47013 ECM12YHR021W-A 456 nt0.95□□□□□ -2.26
LCB3P47013 OLI1Q0130 231 nt0.94□□□□□ -2.26
LCB3P47013 VAM6YDL077C 3150 nt0.93□□□□□ -2.26
LCB3P47013 YER181CYER181C 324 nt0.93□□□□□ -2.26
LCB3P47013 YLR120W-AYLR120W-A 102 nt0.93□□□□□ -2.26
LCB3P47013 YOR015WYOR015W 360 nt0.93□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms