Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.02■□□□□ 0.96
SLC1A1P43005 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A1P43005 PTBP1P-201ENST00000554374 1601 ntBASIC21.02■□□□□ 0.96
SLC1A1P43005 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC1A1P43005 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
SLC1A1P43005 AC007952.6-201ENST00000573168 2673 ntBASIC21.02■□□□□ 0.96
SLC1A1P43005 AC003957.1-201ENST00000625108 2673 ntBASIC21.02■□□□□ 0.96
SLC1A1P43005 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A1P43005 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SLC1A1P43005 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SLC1A1P43005 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC1A1P43005 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC1A1P43005 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
SLC1A1P43005 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC1A1P43005 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC1A1P43005 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 AC011767.1-201ENST00000617410 1153 ntBASIC21.01■□□□□ 0.95
SLC1A1P43005 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC1A1P43005 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC1A1P43005 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC1A1P43005 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC1A1P43005 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A1P43005 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC1A1P43005 GOLGA2P11-201ENST00000562660 1621 ntBASIC21■□□□□ 0.95
SLC1A1P43005 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21■□□□□ 0.95
SLC1A1P43005 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC1A1P43005 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21■□□□□ 0.95
SLC1A1P43005 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC1A1P43005 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC1A1P43005 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 KRT18P68-201ENST00000392293 1000 ntBASIC21■□□□□ 0.95
SLC1A1P43005 AC026271.2-201ENST00000428091 497 ntBASIC21■□□□□ 0.95
SLC1A1P43005 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21■□□□□ 0.95
SLC1A1P43005 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21■□□□□ 0.95
SLC1A1P43005 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21■□□□□ 0.95
SLC1A1P43005 AC105020.6-201ENST00000621523 1217 ntBASIC21■□□□□ 0.95
SLC1A1P43005 KRT8P17-201ENST00000453110 1448 ntBASIC21■□□□□ 0.95
SLC1A1P43005 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SLC1A1P43005 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A1P43005 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SLC1A1P43005 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC1A1P43005 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC1A1P43005 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SLC1A1P43005 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC1A1P43005 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC1A1P43005 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC1A1P43005 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A1P43005 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC1A1P43005 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC1A1P43005 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC1A1P43005 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC1A1P43005 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 AC069236.1-201ENST00000604339 616 ntBASIC20.98■□□□□ 0.95
SLC1A1P43005 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC1A1P43005 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC1A1P43005 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC1A1P43005 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC1A1P43005 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A1P43005 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SLC1A1P43005 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SLC1A1P43005 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A1P43005 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A1P43005 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms