Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.07■□□□□ 0.96
MTHFRP42898 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.07■□□□□ 0.96
MTHFRP42898 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.07■□□□□ 0.96
MTHFRP42898 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 AC079598.2-202ENST00000546624 1451 ntBASIC21.07■□□□□ 0.96
MTHFRP42898 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 AC242852.2-201ENST00000615738 1807 ntBASIC21.06■□□□□ 0.96
MTHFRP42898 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.06■□□□□ 0.96
MTHFRP42898 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.06■□□□□ 0.96
MTHFRP42898 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.06■□□□□ 0.96
MTHFRP42898 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
MTHFRP42898 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.06■□□□□ 0.96
MTHFRP42898 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.06■□□□□ 0.96
MTHFRP42898 AP000525.1-201ENST00000608286 694 ntBASIC21.06■□□□□ 0.96
MTHFRP42898 REXO1L10P-201ENST00000615707 1290 ntBASIC21.06■□□□□ 0.96
MTHFRP42898 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 LINC01568-207ENST00000641790 1380 ntBASIC21.06■□□□□ 0.96
MTHFRP42898 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MTHFRP42898 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
MTHFRP42898 KRT8P9-201ENST00000558927 1449 ntBASIC21.05■□□□□ 0.96
MTHFRP42898 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTHFRP42898 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTHFRP42898 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.05■□□□□ 0.96
MTHFRP42898 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.05■□□□□ 0.96
MTHFRP42898 MIR1238-201ENST00000408483 83 ntBASIC21.05■□□□□ 0.96
MTHFRP42898 AC113347.1-201ENST00000413321 391 ntBASIC21.05■□□□□ 0.96
MTHFRP42898 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.05■□□□□ 0.96
MTHFRP42898 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.05■□□□□ 0.96
MTHFRP42898 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MTHFRP42898 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.05■□□□□ 0.96
MTHFRP42898 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.05■□□□□ 0.96
MTHFRP42898 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MTHFRP42898 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTHFRP42898 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MTHFRP42898 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTHFRP42898 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.05■□□□□ 0.96
MTHFRP42898 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MTHFRP42898 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTHFRP42898 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.04■□□□□ 0.96
MTHFRP42898 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
MTHFRP42898 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
MTHFRP42898 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
MTHFRP42898 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.04■□□□□ 0.96
MTHFRP42898 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.04■□□□□ 0.96
MTHFRP42898 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.04■□□□□ 0.96
MTHFRP42898 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.04■□□□□ 0.96
MTHFRP42898 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 PKD1P6-201ENST00000343738 4769 ntBASIC21.04■□□□□ 0.96
MTHFRP42898 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MTHFRP42898 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.04■□□□□ 0.96
MTHFRP42898 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.03■□□□□ 0.96
MTHFRP42898 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTHFRP42898 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTHFRP42898 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.03■□□□□ 0.96
MTHFRP42898 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.03■□□□□ 0.96
MTHFRP42898 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTHFRP42898 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTHFRP42898 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MTHFRP42898 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTHFRP42898 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MTHFRP42898 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.03■□□□□ 0.96
MTHFRP42898 NAPSB-206ENST00000562112 1266 ntBASIC21.03■□□□□ 0.96
MTHFRP42898 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.03■□□□□ 0.96
MTHFRP42898 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.03■□□□□ 0.96
MTHFRP42898 AC124283.5-201ENST00000624661 1809 ntBASIC21.03■□□□□ 0.96
MTHFRP42898 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.03■□□□□ 0.96
MTHFRP42898 KRT18P22-201ENST00000402024 1347 ntBASIC21.03■□□□□ 0.96
MTHFRP42898 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.02■□□□□ 0.96
MTHFRP42898 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MTHFRP42898 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.02■□□□□ 0.96
MTHFRP42898 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.02■□□□□ 0.96
MTHFRP42898 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.02■□□□□ 0.96
MTHFRP42898 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.02■□□□□ 0.96
MTHFRP42898 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MTHFRP42898 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MTHFRP42898 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.02■□□□□ 0.96
MTHFRP42898 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.01■□□□□ 0.95
MTHFRP42898 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.01■□□□□ 0.95
MTHFRP42898 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms