Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC30.3■■■□□ 2.44
KDM5CP41229 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
KDM5CP41229 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.3■■■□□ 2.44
KDM5CP41229 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.3■■■□□ 2.44
KDM5CP41229 CR392000.1-201ENST00000624770 1228 ntBASIC30.3■■■□□ 2.44
KDM5CP41229 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
KDM5CP41229 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
KDM5CP41229 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.3■■■□□ 2.44
KDM5CP41229 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
KDM5CP41229 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.29■■■□□ 2.44
KDM5CP41229 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC30.29■■■□□ 2.44
KDM5CP41229 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 C2orf69P3-201ENST00000565542 1120 ntBASIC30.29■■■□□ 2.44
KDM5CP41229 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.29■■■□□ 2.44
KDM5CP41229 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC30.29■■■□□ 2.44
KDM5CP41229 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.29■■■□□ 2.44
KDM5CP41229 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KDM5CP41229 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
KDM5CP41229 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
KDM5CP41229 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.28■■■□□ 2.44
KDM5CP41229 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
KDM5CP41229 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
KDM5CP41229 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
KDM5CP41229 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC30.28■■■□□ 2.44
KDM5CP41229 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
KDM5CP41229 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
KDM5CP41229 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC30.28■■■□□ 2.44
KDM5CP41229 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
KDM5CP41229 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.28■■■□□ 2.44
KDM5CP41229 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.28■■■□□ 2.44
KDM5CP41229 AL117328.2-201ENST00000624617 1940 ntBASIC30.27■■■□□ 2.44
KDM5CP41229 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC30.27■■■□□ 2.44
KDM5CP41229 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
KDM5CP41229 AC011484.1-201ENST00000377652 1995 ntBASIC30.27■■■□□ 2.44
KDM5CP41229 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC30.27■■■□□ 2.44
KDM5CP41229 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.27■■■□□ 2.44
KDM5CP41229 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
KDM5CP41229 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
KDM5CP41229 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
KDM5CP41229 TSPY14P-201ENST00000303979 915 ntBASIC30.26■■■□□ 2.43
KDM5CP41229 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KDM5CP41229 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KDM5CP41229 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KDM5CP41229 ISCU-203ENST00000431221 799 ntTSL 2 BASIC30.26■■■□□ 2.43
KDM5CP41229 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
KDM5CP41229 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC30.26■■■□□ 2.43
KDM5CP41229 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KDM5CP41229 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.26■■■□□ 2.43
KDM5CP41229 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.26■■■□□ 2.43
KDM5CP41229 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
KDM5CP41229 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
KDM5CP41229 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
KDM5CP41229 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
KDM5CP41229 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KDM5CP41229 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.24■■■□□ 2.43
KDM5CP41229 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
KDM5CP41229 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.24■■■□□ 2.43
KDM5CP41229 AC063952.2-201ENST00000498792 1227 ntBASIC30.24■■■□□ 2.43
KDM5CP41229 FAM87A-204ENST00000613235 858 ntBASIC30.24■■■□□ 2.43
KDM5CP41229 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
KDM5CP41229 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
KDM5CP41229 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.24■■■□□ 2.43
KDM5CP41229 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
KDM5CP41229 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KDM5CP41229 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KDM5CP41229 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
KDM5CP41229 AC027702.1-201ENST00000563810 1770 ntBASIC30.24■■■□□ 2.43
KDM5CP41229 NMU-205ENST00000511469 756 ntTSL 3 BASIC30.24■■■□□ 2.43
KDM5CP41229 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
KDM5CP41229 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC30.24■■■□□ 2.43
KDM5CP41229 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC30.24■■■□□ 2.43
KDM5CP41229 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC30.24■■■□□ 2.43
KDM5CP41229 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC30.24■■■□□ 2.43
KDM5CP41229 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.24■■■□□ 2.43
KDM5CP41229 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KDM5CP41229 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
KDM5CP41229 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KDM5CP41229 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KDM5CP41229 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KDM5CP41229 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KDM5CP41229 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KDM5CP41229 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC30.23■■■□□ 2.43
KDM5CP41229 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.23■■■□□ 2.43
KDM5CP41229 B3GAT3P1-201ENST00000471720 806 ntBASIC30.23■■■□□ 2.43
KDM5CP41229 METTL23-204ENST00000586752 904 ntTSL 2 BASIC30.23■■■□□ 2.43
KDM5CP41229 AL445675.2-201ENST00000620291 557 ntBASIC30.23■■■□□ 2.43
KDM5CP41229 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
KDM5CP41229 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KDM5CP41229 ME2-206ENST00000638410 2289 ntTSL 5 BASIC30.22■■■□□ 2.43
KDM5CP41229 ME2-210ENST00000639255 2262 ntTSL 5 BASIC30.22■■■□□ 2.43
KDM5CP41229 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms