Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC3P40938 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC3P40938 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RFC3P40938 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.38■□□□□ 0.53
RFC3P40938 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 KRT8P36-201ENST00000489121 1440 ntBASIC18.38■□□□□ 0.53
RFC3P40938 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC3P40938 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
RFC3P40938 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.37■□□□□ 0.53
RFC3P40938 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RFC3P40938 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 AL596275.1-201ENST00000423464 877 ntBASIC18.37■□□□□ 0.53
RFC3P40938 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.37■□□□□ 0.53
RFC3P40938 AC008550.1-201ENST00000511500 884 ntBASIC18.37■□□□□ 0.53
RFC3P40938 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.37■□□□□ 0.53
RFC3P40938 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.37■□□□□ 0.53
RFC3P40938 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC3P40938 AC120498.8-201ENST00000614275 531 ntBASIC18.37■□□□□ 0.53
RFC3P40938 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RFC3P40938 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFC3P40938 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFC3P40938 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC3P40938 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 AC005229.4-201ENST00000610085 2198 ntBASIC18.37■□□□□ 0.53
RFC3P40938 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC3P40938 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFC3P40938 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RFC3P40938 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RFC3P40938 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC3P40938 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC3P40938 UBE2SP1-201ENST00000450587 669 ntBASIC18.36■□□□□ 0.53
RFC3P40938 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC3P40938 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RFC3P40938 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RFC3P40938 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.36■□□□□ 0.53
RFC3P40938 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 AL023875.1-201ENST00000640777 796 ntBASIC18.36■□□□□ 0.53
RFC3P40938 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC3P40938 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
RFC3P40938 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RFC3P40938 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC3P40938 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC3P40938 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RFC3P40938 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC3P40938 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC3P40938 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC3P40938 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC3P40938 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.35■□□□□ 0.53
RFC3P40938 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC3P40938 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC3P40938 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.35■□□□□ 0.53
RFC3P40938 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.35■□□□□ 0.53
RFC3P40938 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.35■□□□□ 0.53
RFC3P40938 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
RFC3P40938 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RFC3P40938 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC3P40938 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC3P40938 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC3P40938 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC3P40938 FP700111.2-201ENST00000619190 1892 ntBASIC18.35■□□□□ 0.53
RFC3P40938 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC3P40938 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC3P40938 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC3P40938 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.34■□□□□ 0.53
RFC3P40938 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC3P40938 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC3P40938 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC3P40938 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms