Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.78■■□□□ 1.08
USP8P40818 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
USP8P40818 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 CYP21A1P-202ENST00000354927 1481 ntBASIC21.78■■□□□ 1.08
USP8P40818 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
USP8P40818 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
USP8P40818 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.78■■□□□ 1.08
USP8P40818 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.78■■□□□ 1.08
USP8P40818 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.78■■□□□ 1.08
USP8P40818 AL162412.1-201ENST00000567129 965 ntBASIC21.78■■□□□ 1.08
USP8P40818 AC231657.2-201ENST00000624556 255 ntBASIC21.78■■□□□ 1.08
USP8P40818 AC092437.1-201ENST00000624794 1048 ntBASIC21.78■■□□□ 1.08
USP8P40818 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
USP8P40818 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
USP8P40818 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
USP8P40818 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
USP8P40818 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.78■■□□□ 1.08
USP8P40818 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
USP8P40818 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP8P40818 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
USP8P40818 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.77■■□□□ 1.08
USP8P40818 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
USP8P40818 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
USP8P40818 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.77■■□□□ 1.08
USP8P40818 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
USP8P40818 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.77■■□□□ 1.08
USP8P40818 PGM5P4-201ENST00000421970 445 ntBASIC21.77■■□□□ 1.08
USP8P40818 RARRES2P4-201ENST00000514074 484 ntBASIC21.77■■□□□ 1.08
USP8P40818 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.77■■□□□ 1.08
USP8P40818 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 AL356652.1-201ENST00000615962 565 ntBASIC21.77■■□□□ 1.08
USP8P40818 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.77■■□□□ 1.08
USP8P40818 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
USP8P40818 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP8P40818 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
USP8P40818 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
USP8P40818 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
USP8P40818 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.76■■□□□ 1.07
USP8P40818 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 CYP2T1P-201ENST00000432607 1285 ntBASIC21.76■■□□□ 1.07
USP8P40818 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 AC087633.2-202ENST00000565166 1439 ntBASIC21.76■■□□□ 1.07
USP8P40818 AL137784.2-201ENST00000607332 1000 ntBASIC21.76■■□□□ 1.07
USP8P40818 AC080038.1-201ENST00000611274 1154 ntBASIC21.76■■□□□ 1.07
USP8P40818 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 AC008694.1-202ENST00000636953 945 ntBASIC21.76■■□□□ 1.07
USP8P40818 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.76■■□□□ 1.07
USP8P40818 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP8P40818 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.75■■□□□ 1.07
USP8P40818 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP8P40818 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP8P40818 AL162377.1-201ENST00000618844 1793 ntBASIC21.75■■□□□ 1.07
USP8P40818 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
USP8P40818 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.75■■□□□ 1.07
USP8P40818 AC069236.1-201ENST00000604339 616 ntBASIC21.75■■□□□ 1.07
USP8P40818 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms