Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 SLX4YLR135W 2247 nt1.66□□□□□ -2.14
VPS27P40343 SMC4YLR086W 4257 nt1.65□□□□□ -2.14
VPS27P40343 IFH1YLR223C 3258 nt1.65□□□□□ -2.15
VPS27P40343 SSS1YDR086C 243 nt1.65□□□□□ -2.15
VPS27P40343 YIL032CYIL032C 357 nt1.65□□□□□ -2.15
VPS27P40343 COG4YPR105C 2586 nt1.65□□□□□ -2.15
VPS27P40343 HKR1YDR420W 5409 nt1.65□□□□□ -2.15
VPS27P40343 LCD1YDR499W 2244 nt1.64□□□□□ -2.15
VPS27P40343 SEC21YNL287W 2808 nt1.64□□□□□ -2.15
VPS27P40343 MDS3YGL197W 4464 nt1.64□□□□□ -2.15
VPS27P40343 YLR422WYLR422W 5799 nt1.63□□□□□ -2.15
VPS27P40343 ALG13YGL047W 609 nt1.63□□□□□ -2.15
VPS27P40343 ANS1YHR126C 480 nt1.63□□□□□ -2.15
VPS27P40343 YBL008W-AYBL008W-A 240 nt1.63□□□□□ -2.15
VPS27P40343 YOR161W-BYOR161W-B 261 nt1.63□□□□□ -2.15
VPS27P40343 AZF1YOR113W 2745 nt1.63□□□□□ -2.15
VPS27P40343 SEC5YDR166C 2916 nt1.63□□□□□ -2.15
VPS27P40343 YHL042WYHL042W 453 nt1.62□□□□□ -2.15
VPS27P40343 snR14snR14 160 nt1.62□□□□□ -2.15
VPS27P40343 SPT21YMR179W 2277 nt1.62□□□□□ -2.15
VPS27P40343 YDR521WYDR521W 336 nt1.61□□□□□ -2.15
VPS27P40343 INA22YIR024C 651 nt1.61□□□□□ -2.15
VPS27P40343 YJL120WYJL120W 324 nt1.61□□□□□ -2.15
VPS27P40343 AHC1YOR023C 1701 nt1.6□□□□□ -2.15
VPS27P40343 tH(GUG)E1tH(GUG)E1 72 nt1.6□□□□□ -2.15
VPS27P40343 tH(GUG)E2tH(GUG)E2 72 nt1.6□□□□□ -2.15
VPS27P40343 tH(GUG)G1tH(GUG)G1 72 nt1.6□□□□□ -2.15
VPS27P40343 tH(GUG)G2tH(GUG)G2 72 nt1.6□□□□□ -2.15
VPS27P40343 tH(GUG)HtH(GUG)H 72 nt1.6□□□□□ -2.15
VPS27P40343 tH(GUG)KtH(GUG)K 72 nt1.6□□□□□ -2.15
VPS27P40343 tH(GUG)MtH(GUG)M 72 nt1.6□□□□□ -2.15
VPS27P40343 YER181CYER181C 324 nt1.6□□□□□ -2.15
VPS27P40343 CUL3YGR003W 2235 nt1.6□□□□□ -2.15
VPS27P40343 PMD1YER132C 5262 nt1.6□□□□□ -2.15
VPS27P40343 CLU1YMR012W 3834 nt1.59□□□□□ -2.15
VPS27P40343 COG8YML071C 1824 nt1.59□□□□□ -2.15
VPS27P40343 SWI4YER111C 3282 nt1.59□□□□□ -2.15
VPS27P40343 PAN2YGL094C 3348 nt1.59□□□□□ -2.15
VPS27P40343 PIK1YNL267W 3201 nt1.59□□□□□ -2.16
VPS27P40343 RSM22YKL155C 1887 nt1.58□□□□□ -2.16
VPS27P40343 YLL054CYLL054C 2532 nt1.58□□□□□ -2.16
VPS27P40343 snR60snR60 104 nt1.58□□□□□ -2.16
VPS27P40343 RRT15YLR162W-A 189 nt1.58□□□□□ -2.16
VPS27P40343 YLL007CYLL007C 1998 nt1.58□□□□□ -2.16
VPS27P40343 PTP2YOR208W 2253 nt1.57□□□□□ -2.16
VPS27P40343 HMRA2YCR096C 360 nt1.56□□□□□ -2.16
VPS27P40343 RPS25BYLR333C 327 nt1.56□□□□□ -2.16
VPS27P40343 SPO21YOL091W 1830 nt1.56□□□□□ -2.16
VPS27P40343 APL3YBL037W 3078 nt1.55□□□□□ -2.16
VPS27P40343 PKH2YOL100W 3246 nt1.55□□□□□ -2.16
VPS27P40343 YMR321CYMR321C 318 nt1.55□□□□□ -2.16
VPS27P40343 RPL33BYOR234C 324 nt1.55□□□□□ -2.16
VPS27P40343 YBR206WYBR206W 324 nt1.55□□□□□ -2.16
VPS27P40343 VIK1YPL253C 1944 nt1.55□□□□□ -2.16
VPS27P40343 RAD61YDR014W 1944 nt1.54□□□□□ -2.16
VPS27P40343 PIP2YOR363C 2991 nt1.54□□□□□ -2.16
VPS27P40343 SLD3YGL113W 2007 nt1.54□□□□□ -2.16
VPS27P40343 NUP188YML103C 4968 nt1.53□□□□□ -2.16
VPS27P40343 GPG1YGL121C 381 nt1.53□□□□□ -2.16
VPS27P40343 MMS4YBR098W 2076 nt1.53□□□□□ -2.16
VPS27P40343 YDL206WYDL206W 2289 nt1.52□□□□□ -2.17
VPS27P40343 CSE2YNR010W 450 nt1.52□□□□□ -2.17
VPS27P40343 SET3YKR029C 2256 nt1.52□□□□□ -2.17
VPS27P40343 SEC3YER008C 4011 nt1.52□□□□□ -2.17
VPS27P40343 YEL020C-BYEL020C-B 198 nt1.51□□□□□ -2.17
VPS27P40343 YOR011W-AYOR011W-A 207 nt1.51□□□□□ -2.17
VPS27P40343 CDC39YCR093W 6327 nt1.51□□□□□ -2.17
VPS27P40343 YGR069WYGR069W 336 nt1.5□□□□□ -2.17
VPS27P40343 YOR008C-AYOR008C-A 225 nt1.5□□□□□ -2.17
VPS27P40343 RPS27BYHR021C 249 nt1.49□□□□□ -2.17
VPS27P40343 YLL020CYLL020C 306 nt1.49□□□□□ -2.17
VPS27P40343 YML099W-AYML099W-A 330 nt1.49□□□□□ -2.17
VPS27P40343 YNL028WYNL028W 318 nt1.49□□□□□ -2.17
VPS27P40343 YOR015WYOR015W 360 nt1.49□□□□□ -2.17
VPS27P40343 ROM2YLR371W 4071 nt1.49□□□□□ -2.17
VPS27P40343 NUP145YGL092W 3954 nt1.49□□□□□ -2.17
VPS27P40343 AIM44YPL158C 2277 nt1.49□□□□□ -2.17
VPS27P40343 YLR120W-AYLR120W-A 102 nt1.48□□□□□ -2.17
VPS27P40343 YPL152W-AYPL152W-A 99 nt1.48□□□□□ -2.17
VPS27P40343 YBR221W-AYBR221W-A 105 nt1.48□□□□□ -2.17
VPS27P40343 PBY1YBR094W 2262 nt1.48□□□□□ -2.17
VPS27P40343 YAR009CYAR009C 3591 nt1.48□□□□□ -2.17
VPS27P40343 IML1YJR138W 4755 nt1.47□□□□□ -2.17
VPS27P40343 PDE2YOR360C 1581 nt1.47□□□□□ -2.17
VPS27P40343 YMR172C-AYMR172C-A 384 nt1.46□□□□□ -2.18
VPS27P40343 IES4YOR189W 351 nt1.46□□□□□ -2.18
VPS27P40343 FIG4YNL325C 2640 nt1.46□□□□□ -2.18
VPS27P40343 EAF1YDR359C 2949 nt1.46□□□□□ -2.18
VPS27P40343 STO1YMR125W 2586 nt1.46□□□□□ -2.18
VPS27P40343 STB6YKL072W 2301 nt1.45□□□□□ -2.18
VPS27P40343 RAD9YDR217C 3930 nt1.45□□□□□ -2.18
VPS27P40343 CDC36YDL165W 576 nt1.45□□□□□ -2.18
VPS27P40343 YOR218CYOR218C 420 nt1.45□□□□□ -2.18
VPS27P40343 YBR064WYBR064W 429 nt1.43□□□□□ -2.18
VPS27P40343 SIP4YJL089W 2490 nt1.43□□□□□ -2.18
VPS27P40343 NUP157YER105C 4176 nt1.43□□□□□ -2.18
VPS27P40343 YGR130CYGR130C 2451 nt1.42□□□□□ -2.18
VPS27P40343 NST1YNL091W 3723 nt1.41□□□□□ -2.18
VPS27P40343 YIL020C-AYIL020C-A 339 nt1.41□□□□□ -2.18
VPS27P40343 YJL197C-AYJL197C-A 282 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 33.2 ms