Protein–RNA interactions for Protein: P40046

VTC1, Vacuolar transporter chaperone 1, yeastyeast

RIP-Chip data

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC1P40046 YBR206WYBR206W 324 nt0.63□□□□□ -2.31
VTC1P40046 YPR117WYPR117W 7470 nt0.63□□□□□ -2.31
VTC1P40046 TTI1YKL033W 3117 nt0.63□□□□□ -2.31 RIP-Chip
VTC1P40046 PAN2YGL094C 3348 nt0.63□□□□□ -2.31
VTC1P40046 INP2YMR163C 2118 nt0.62□□□□□ -2.31
VTC1P40046 MMS4YBR098W 2076 nt0.61□□□□□ -2.31
VTC1P40046 ASE1YOR058C 2658 nt0.61□□□□□ -2.31
VTC1P40046 CSN9YDR179C 489 nt0.61□□□□□ -2.31
VTC1P40046 YDR521WYDR521W 336 nt0.61□□□□□ -2.31
VTC1P40046 YDR426CYDR426C 378 nt0.6□□□□□ -2.31
VTC1P40046 ALG13YGL047W 609 nt0.6□□□□□ -2.31
VTC1P40046 MAM33YIL070C 801 nt0.6□□□□□ -2.31
VTC1P40046 YOR108C-AYOR108C-A 210 nt0.6□□□□□ -2.31
VTC1P40046 LEE1YPL054W 906 nt0.6□□□□□ -2.31
VTC1P40046 BFR2YDR299W 1605 nt0.6□□□□□ -2.31
VTC1P40046 YER137W-AYER137W-A 306 nt0.59□□□□□ -2.31
VTC1P40046 AGA2YGL032C 264 nt0.59□□□□□ -2.31
VTC1P40046 YOR072W-AYOR072W-A 249 nt0.59□□□□□ -2.31
VTC1P40046 YOR293C-AYOR293C-A 150 nt0.59□□□□□ -2.31
VTC1P40046 YBR285WYBR285W 435 nt0.59□□□□□ -2.31
VTC1P40046 SEC1YDR164C 2175 nt0.59□□□□□ -2.32
VTC1P40046 LTE1YAL024C 4308 nt0.58□□□□□ -2.32
VTC1P40046 YLR264C-AYLR264C-A 117 nt0.58□□□□□ -2.32
VTC1P40046 BSC3YLR465C 309 nt0.58□□□□□ -2.32
VTC1P40046 YMR290W-AYMR290W-A 348 nt0.58□□□□□ -2.32
VTC1P40046 YNL058CYNL058C 951 nt0.58□□□□□ -2.32
VTC1P40046 YPR002C-AYPR002C-A 198 nt0.58□□□□□ -2.32
VTC1P40046 WAR1YML076C 2835 nt0.58□□□□□ -2.32
VTC1P40046 PKH2YOL100W 3246 nt0.57□□□□□ -2.32
VTC1P40046 GPG1YGL121C 381 nt0.57□□□□□ -2.32
VTC1P40046 YGR174W-AYGR174W-A 87 nt0.57□□□□□ -2.32
VTC1P40046 YKL063CYKL063C 504 nt0.57□□□□□ -2.32
VTC1P40046 YLR222C-AYLR222C-A 231 nt0.57□□□□□ -2.32
VTC1P40046 RPL38YLR325C 237 nt0.57□□□□□ -2.32
VTC1P40046 GEA2YEL022W 4380 nt0.57□□□□□ -2.32
VTC1P40046 MCM10YIL150C 1716 nt0.56□□□□□ -2.32
VTC1P40046 YML007C-AYML007C-A 111 nt0.56□□□□□ -2.32
VTC1P40046 YNL324WYNL324W 396 nt0.56□□□□□ -2.32
VTC1P40046 YPR159C-AYPR159C-A 102 nt0.56□□□□□ -2.32
VTC1P40046 YCK3YER123W 1575 nt0.56□□□□□ -2.32
VTC1P40046 UBP3YER151C 2739 nt0.55□□□□□ -2.32
VTC1P40046 NOP9YJL010C 2001 nt0.54□□□□□ -2.32
VTC1P40046 NHP2YDL208W 471 nt0.54□□□□□ -2.32
VTC1P40046 YFR012W-AYFR012W-A 87 nt0.54□□□□□ -2.32
VTC1P40046 PAM16YJL104W 450 nt0.54□□□□□ -2.32
VTC1P40046 YLR334CYLR334C 381 nt0.54□□□□□ -2.32
VTC1P40046 IES4YOR189W 351 nt0.54□□□□□ -2.32
VTC1P40046 tW(UCA)QtW(UCA)Q 74 nt0.53□□□□□ -2.32
VTC1P40046 YOR121CYOR121C 306 nt0.53□□□□□ -2.32
VTC1P40046 YDR344CYDR344C 444 nt0.52□□□□□ -2.33
VTC1P40046 YMR031W-AYMR031W-A 327 nt0.52□□□□□ -2.33
VTC1P40046 YMR272W-AYMR272W-A 114 nt0.52□□□□□ -2.33
VTC1P40046 YOR053WYOR053W 342 nt0.52□□□□□ -2.33
VTC1P40046 YLL007CYLL007C 1998 nt0.52□□□□□ -2.33
VTC1P40046 PMP1YCR024C-A 123 nt0.51□□□□□ -2.33
VTC1P40046 ISD11YER048W-A 285 nt0.51□□□□□ -2.33
VTC1P40046 YJL120WYJL120W 324 nt0.51□□□□□ -2.33
VTC1P40046 DBP6YNR038W 1890 nt0.51□□□□□ -2.33
VTC1P40046 YIR044CYIR044C 186 nt0.5□□□□□ -2.33
VTC1P40046 YAL068W-AYAL068W-A 255 nt0.5□□□□□ -2.33
VTC1P40046 CHS6YJL099W 2241 nt0.49□□□□□ -2.33
VTC1P40046 OLI1Q0130 231 nt0.49□□□□□ -2.33
VTC1P40046 VAR1Q0140 1197 nt0.49□□□□□ -2.33
VTC1P40046 CUL3YGR003W 2235 nt0.49□□□□□ -2.33
VTC1P40046 RPL35AYDL191W 363 nt0.48□□□□□ -2.33
VTC1P40046 YHR063W-AYHR063W-A 336 nt0.48□□□□□ -2.33
VTC1P40046 YMR001C-AYMR001C-A 231 nt0.48□□□□□ -2.33
VTC1P40046 CMC4YMR194C-B 222 nt0.48□□□□□ -2.33
VTC1P40046 YSP1YHR155W 3687 nt0.47□□□□□ -2.33
VTC1P40046 UTP10YJL109C 5310 nt0.47□□□□□ -2.33
VTC1P40046 ECM12YHR021W-A 456 nt0.47□□□□□ -2.33
VTC1P40046 TAR1YLR154W-C 375 nt0.47□□□□□ -2.33
VTC1P40046 YLR154W-FYLR154W-F 141 nt0.47□□□□□ -2.33
VTC1P40046 YNL211CYNL211C 261 nt0.47□□□□□ -2.33
VTC1P40046 SPO21YOL091W 1830 nt0.47□□□□□ -2.33
VTC1P40046 YDR118W-AYDR118W-A 117 nt0.46□□□□□ -2.34
VTC1P40046 YHR007C-AYHR007C-A 216 nt0.46□□□□□ -2.34
VTC1P40046 PCC1YKR095W-A 267 nt0.46□□□□□ -2.34
VTC1P40046 YAR053WYAR053W 297 nt0.46□□□□□ -2.34
VTC1P40046 SSS1YDR086C 243 nt0.45□□□□□ -2.34
VTC1P40046 INA22YIR024C 651 nt0.45□□□□□ -2.34
VTC1P40046 YAR029WYAR029W 225 nt0.45□□□□□ -2.34
VTC1P40046 YPL225WYPL225W 441 nt0.45□□□□□ -2.34
VTC1P40046 YML002WYML002W 2214 nt0.44□□□□□ -2.34
VTC1P40046 YDL185C-AYDL185C-A 228 nt0.44□□□□□ -2.34
VTC1P40046 RPS25BYLR333C 327 nt0.44□□□□□ -2.34
VTC1P40046 YOR011W-AYOR011W-A 207 nt0.44□□□□□ -2.34
VTC1P40046 YOR282WYOR282W 321 nt0.44□□□□□ -2.34
VTC1P40046 OST1YJL002C 1431 nt0.44□□□□□ -2.34
VTC1P40046 PTP2YOR208W 2253 nt0.44□□□□□ -2.34
VTC1P40046 YIL115W-AYIL115W-A 372 nt0.43□□□□□ -2.34
VTC1P40046 NPR2YEL062W 1848 nt0.43□□□□□ -2.34
VTC1P40046 FYV10YIL097W 1551 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)BtT(AGU)B 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)CtT(AGU)C 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)DtT(AGU)D 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)HtT(AGU)H 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)I1tT(AGU)I1 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)I2tT(AGU)I2 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)JtT(AGU)J 73 nt0.42□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 6.8 ms