Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 TRA1YHR099W 11235 nt2.39□□□□□ -2.03
PEX28P38848 YOR055WYOR055W 435 nt2.38□□□□□ -2.03
PEX28P38848 SBE22YHR103W 2559 nt2.37□□□□□ -2.03
PEX28P38848 IRA2YOL081W 9240 nt2.37□□□□□ -2.03
PEX28P38848 ALK1YGL021W 2283 nt2.37□□□□□ -2.03
PEX28P38848 YDR521WYDR521W 336 nt2.36□□□□□ -2.03
PEX28P38848 RTT101YJL047C 2529 nt2.36□□□□□ -2.03
PEX28P38848 TDA9YML081W 3756 nt2.35□□□□□ -2.03
PEX28P38848 SAP190YKR028W 3102 nt2.35□□□□□ -2.03
PEX28P38848 YCR087C-AYCR087C-A 462 nt2.35□□□□□ -2.03
PEX28P38848 TIM9YEL020W-A 264 nt2.35□□□□□ -2.03
PEX28P38848 MLH1YMR167W 2310 nt2.35□□□□□ -2.03
PEX28P38848 IRE1YHR079C 3348 nt2.35□□□□□ -2.03
PEX28P38848 YPR097WYPR097W 3222 nt2.34□□□□□ -2.03
PEX28P38848 PBY1YBR094W 2262 nt2.34□□□□□ -2.03
PEX28P38848 SAP185YJL098W 3177 nt2.34□□□□□ -2.04
PEX28P38848 SCD5YOR329C 2619 nt2.34□□□□□ -2.04
PEX28P38848 YEF3YLR249W 3135 nt2.33□□□□□ -2.04
PEX28P38848 CHC1YGL206C 4962 nt2.33□□□□□ -2.04
PEX28P38848 YHL015W-AYHL015W-A 84 nt2.33□□□□□ -2.04
PEX28P38848 STH1YIL126W 4080 nt2.32□□□□□ -2.04
PEX28P38848 YMR175W-AYMR175W-A 195 nt2.32□□□□□ -2.04
PEX28P38848 YOR102WYOR102W 351 nt2.32□□□□□ -2.04
PEX28P38848 YPL044CYPL044C 549 nt2.32□□□□□ -2.04
PEX28P38848 PKH2YOL100W 3246 nt2.3□□□□□ -2.04
PEX28P38848 SLI15YBR156C 2097 nt2.3□□□□□ -2.04
PEX28P38848 YBR206WYBR206W 324 nt2.3□□□□□ -2.04
PEX28P38848 COG4YPR105C 2586 nt2.3□□□□□ -2.04
PEX28P38848 IST2YBR086C 2841 nt2.3□□□□□ -2.04
PEX28P38848 YOR343W-BYOR343W-B 5313 nt2.3□□□□□ -2.04
PEX28P38848 YDR354C-AYDR354C-A 144 nt2.29□□□□□ -2.04
PEX28P38848 FRK1YPL141C 2598 nt2.29□□□□□ -2.04
PEX28P38848 YNL144CYNL144C 2223 nt2.29□□□□□ -2.04
PEX28P38848 ANS1YHR126C 480 nt2.28□□□□□ -2.04
PEX28P38848 YIL134C-AYIL134C-A 204 nt2.28□□□□□ -2.04
PEX28P38848 RPS30BYOR182C 192 nt2.28□□□□□ -2.04
PEX28P38848 YOR314W-AYOR314W-A 111 nt2.28□□□□□ -2.04
PEX28P38848 KIP1YBL063W 3336 nt2.28□□□□□ -2.04
PEX28P38848 YBR178WYBR178W 375 nt2.27□□□□□ -2.05
PEX28P38848 SIR4YDR227W 4077 nt2.26□□□□□ -2.05
PEX28P38848 YJL022WYJL022W 309 nt2.26□□□□□ -2.05
PEX28P38848 YJL026C-AYJL026C-A 222 nt2.26□□□□□ -2.05
PEX28P38848 SEY1YOR165W 2331 nt2.26□□□□□ -2.05
PEX28P38848 CTF4YPR135W 2784 nt2.26□□□□□ -2.05
PEX28P38848 HIR3YJR140C 4947 nt2.25□□□□□ -2.05
PEX28P38848 UTP22YGR090W 3714 nt2.25□□□□□ -2.05
PEX28P38848 YDL118WYDL118W 381 nt2.25□□□□□ -2.05
PEX28P38848 YKL165C-AYKL165C-A 234 nt2.25□□□□□ -2.05
PEX28P38848 COX12YLR038C 252 nt2.24□□□□□ -2.05
PEX28P38848 SPF1YEL031W 3648 nt2.23□□□□□ -2.05
PEX28P38848 PAA1YDR071C 576 nt2.23□□□□□ -2.05
PEX28P38848 TRM3YDL112W 4311 nt2.23□□□□□ -2.05
PEX28P38848 YGR109W-BYGR109W-B 4644 nt2.23□□□□□ -2.05
PEX28P38848 RGA1YOR127W 3024 nt2.23□□□□□ -2.05
PEX28P38848 TOF1YNL273W 3717 nt2.22□□□□□ -2.05
PEX28P38848 SFB2YNL049C 2631 nt2.22□□□□□ -2.05
PEX28P38848 BNI1YNL271C 5862 nt2.22□□□□□ -2.05
PEX28P38848 YDR524C-AYDR524C-A 120 nt2.22□□□□□ -2.05
PEX28P38848 YHR180W-AYHR180W-A 183 nt2.22□□□□□ -2.05
PEX28P38848 YOR329W-AYOR329W-A 210 nt2.22□□□□□ -2.05
PEX28P38848 YCL001W-BYCL001W-B 255 nt2.22□□□□□ -2.05
PEX28P38848 ADR1YDR216W 3972 nt2.22□□□□□ -2.05
PEX28P38848 TTI1YKL033W 3117 nt2.22□□□□□ -2.05
PEX28P38848 GYP5YPL249C 2685 nt2.22□□□□□ -2.05
PEX28P38848 SEC63YOR254C 1992 nt2.21□□□□□ -2.05
PEX28P38848 APL1YJR005W 2103 nt2.21□□□□□ -2.06
PEX28P38848 YCR038W-AYCR038W-A 126 nt2.21□□□□□ -2.06
PEX28P38848 MSH6YDR097C 3729 nt2.21□□□□□ -2.06
PEX28P38848 HER1YOR227W 3741 nt2.21□□□□□ -2.06
PEX28P38848 YOL098CYOL098C 3114 nt2.21□□□□□ -2.06
PEX28P38848 TOR1YJR066W 7413 nt2.18□□□□□ -2.06
PEX28P38848 GCN2YDR283C 4980 nt2.18□□□□□ -2.06
PEX28P38848 SPO24YPR036W-A 204 nt2.18□□□□□ -2.06
PEX28P38848 UTP21YLR409C 2820 nt2.18□□□□□ -2.06
PEX28P38848 VPS13YLL040C 9435 nt2.18□□□□□ -2.06
PEX28P38848 YIL002W-AYIL002W-A 210 nt2.17□□□□□ -2.06
PEX28P38848 NUT1YGL151W 3399 nt2.17□□□□□ -2.06
PEX28P38848 KOG1YHR186C 4674 nt2.17□□□□□ -2.06
PEX28P38848 YDL206WYDL206W 2289 nt2.16□□□□□ -2.06
PEX28P38848 YER053C-AYER053C-A 114 nt2.16□□□□□ -2.06
PEX28P38848 SEC16YPL085W 6588 nt2.16□□□□□ -2.06
PEX28P38848 YFR012W-AYFR012W-A 87 nt2.15□□□□□ -2.07
PEX28P38848 YJR039WYJR039W 3366 nt2.15□□□□□ -2.07
PEX28P38848 PRP5YBR237W 2550 nt2.14□□□□□ -2.07
PEX28P38848 SVL3YPL032C 2478 nt2.14□□□□□ -2.07
PEX28P38848 YNL211CYNL211C 261 nt2.14□□□□□ -2.07
PEX28P38848 TFC3YAL001C 3483 nt2.14□□□□□ -2.07
PEX28P38848 ALY2YJL084C 3141 nt2.12□□□□□ -2.07
PEX28P38848 YAL067W-AYAL067W-A 228 nt2.12□□□□□ -2.07
PEX28P38848 POL5YEL055C 3069 nt2.11□□□□□ -2.07
PEX28P38848 YOR019WYOR019W 2193 nt2.11□□□□□ -2.07
PEX28P38848 tL(UAA)QtL(UAA)Q 85 nt2.11□□□□□ -2.07
PEX28P38848 CDC31YOR257W 486 nt2.11□□□□□ -2.07
PEX28P38848 EMC5YIL027C 426 nt2.1□□□□□ -2.07
PEX28P38848 YJL052C-AYJL052C-A 120 nt2.1□□□□□ -2.07
PEX28P38848 YBL109WYBL109W 336 nt2.1□□□□□ -2.07
PEX28P38848 TOR2YKL203C 7425 nt2.09□□□□□ -2.07
PEX28P38848 MDS3YGL197W 4464 nt2.09□□□□□ -2.07
PEX28P38848 PAN2YGL094C 3348 nt2.09□□□□□ -2.07
PEX28P38848 USO1YDL058W 5373 nt2.09□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 59.5 ms