Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 YML007C-AYML007C-A 111 nt-1.51□□□□□ -2.65
VMR1P38735 YMR290W-AYMR290W-A 348 nt-1.51□□□□□ -2.65
VMR1P38735 YNL162W-AYNL162W-A 219 nt-1.51□□□□□ -2.65
VMR1P38735 YOR015WYOR015W 360 nt-1.51□□□□□ -2.65
VMR1P38735 YPR099CYPR099C 357 nt-1.51□□□□□ -2.65
VMR1P38735 ZIP2YGL249W 2115 nt-1.52□□□□□ -2.65
VMR1P38735 tA(UGC)QtA(UGC)Q 76 nt-1.52□□□□□ -2.65
VMR1P38735 YAP6YDR259C 1152 nt-1.52□□□□□ -2.65
VMR1P38735 ECL1YGR146C 636 nt-1.52□□□□□ -2.65
VMR1P38735 YIL071W-AYIL071W-A 477 nt-1.52□□□□□ -2.65
VMR1P38735 RSM23YGL129C 1353 nt-1.52□□□□□ -2.65
VMR1P38735 YMR158W-BYMR158W-B 321 nt-1.53□□□□□ -2.65
VMR1P38735 YHL046W-AYHL046W-A 327 nt-1.55□□□□□ -2.66
VMR1P38735 YMR153C-AYMR153C-A 336 nt-1.55□□□□□ -2.66
VMR1P38735 PAN3YKL025C 2040 nt-1.55□□□□□ -2.66
VMR1P38735 YER158W-AYER158W-A 216 nt-1.57□□□□□ -2.66
VMR1P38735 YGL042CYGL042C 306 nt-1.57□□□□□ -2.66
VMR1P38735 YJL135WYJL135W 318 nt-1.57□□□□□ -2.66
VMR1P38735 YER076W-AYER076W-A 348 nt-1.58□□□□□ -2.66
VMR1P38735 YHR138CYHR138C 345 nt-1.58□□□□□ -2.66
VMR1P38735 YDL007C-AYDL007C-A 258 nt-1.59□□□□□ -2.66
VMR1P38735 tN(GUU)QtN(GUU)Q 71 nt-1.59□□□□□ -2.66
VMR1P38735 SDS22YKL193C 1017 nt-1.59□□□□□ -2.66
VMR1P38735 YLR198CYLR198C 360 nt-1.59□□□□□ -2.66
VMR1P38735 15S_rRNA15S_rRNA 1649 nt-1.59□□□□□ -2.66
VMR1P38735 YJL086CYJL086C 369 nt-1.6□□□□□ -2.67
VMR1P38735 PSF2YJL072C 642 nt-1.61□□□□□ -2.67
VMR1P38735 YOL160WYOL160W 342 nt-1.63□□□□□ -2.67
VMR1P38735 SPO21YOL091W 1830 nt-1.63□□□□□ -2.67
VMR1P38735 snR79snR79 84 nt-1.64□□□□□ -2.67
VMR1P38735 YER138W-AYER138W-A 105 nt-1.64□□□□□ -2.67
VMR1P38735 PBI2YNL015W 228 nt-1.64□□□□□ -2.67
VMR1P38735 RSM18YER050C 417 nt-1.65□□□□□ -2.67
VMR1P38735 PFS1YHR185C 714 nt-1.65□□□□□ -2.67
VMR1P38735 YLR282CYLR282C 342 nt-1.65□□□□□ -2.67
VMR1P38735 YCR024C-BYCR024C-B 267 nt-1.67□□□□□ -2.68
VMR1P38735 YBL008W-AYBL008W-A 240 nt-1.67□□□□□ -2.68
VMR1P38735 YGL258W-AYGL258W-A 234 nt-1.68□□□□□ -2.68
VMR1P38735 EST1YLR233C 2100 nt-1.69□□□□□ -2.68
VMR1P38735 YBR099CYBR099C 384 nt-1.69□□□□□ -2.68
VMR1P38735 snR24snR24 89 nt-1.69□□□□□ -2.68
VMR1P38735 QCR7YDR529C 384 nt-1.7□□□□□ -2.68
VMR1P38735 YKL068W-AYKL068W-A 237 nt-1.72□□□□□ -2.68
VMR1P38735 YKL111CYKL111C 336 nt-1.73□□□□□ -2.69
VMR1P38735 ATG31YDR022C 591 nt-1.74□□□□□ -2.69
VMR1P38735 YER079WYER079W 633 nt-1.74□□□□□ -2.69
VMR1P38735 YLR171WYLR171W 390 nt-1.74□□□□□ -2.69
VMR1P38735 YMR307C-AYMR307C-A 195 nt-1.74□□□□□ -2.69
VMR1P38735 YLR041WYLR041W 321 nt-1.75□□□□□ -2.69
VMR1P38735 PET20YPL159C 762 nt-1.75□□□□□ -2.69
VMR1P38735 YHR054CYHR054C 1065 nt-1.76□□□□□ -2.69
VMR1P38735 YJR140W-AYJR140W-A 150 nt-1.76□□□□□ -2.69
VMR1P38735 THG1YGR024C 714 nt-1.77□□□□□ -2.69
VMR1P38735 GPX1YKL026C 504 nt-1.77□□□□□ -2.69
VMR1P38735 CMC1YKL137W 336 nt-1.77□□□□□ -2.69
VMR1P38735 YML108WYML108W 318 nt-1.77□□□□□ -2.69
VMR1P38735 PCF11YDR228C 1881 nt-1.78□□□□□ -2.69
VMR1P38735 YIR044CYIR044C 186 nt-1.79□□□□□ -2.7
VMR1P38735 YOL029CYOL029C 606 nt-1.79□□□□□ -2.7
VMR1P38735 RPF1YHR088W 888 nt-1.8□□□□□ -2.7
VMR1P38735 YDR269CYDR269C 324 nt-1.81□□□□□ -2.7
VMR1P38735 DCP1YOL149W 696 nt-1.81□□□□□ -2.7
VMR1P38735 LSM4YER112W 564 nt-1.82□□□□□ -2.7
VMR1P38735 YMR254CYMR254C 309 nt-1.82□□□□□ -2.7
VMR1P38735 YPL261CYPL261C 309 nt-1.83□□□□□ -2.7
VMR1P38735 YDR290WYDR290W 330 nt-1.84□□□□□ -2.7
VMR1P38735 tT(UGU)Q1tT(UGU)Q1 76 nt-1.84□□□□□ -2.7
VMR1P38735 YFL063WYFL063W 456 nt-1.85□□□□□ -2.71
VMR1P38735 YGL123C-AYGL123C-A 231 nt-1.86□□□□□ -2.71
VMR1P38735 YHL041WYHL041W 450 nt-1.86□□□□□ -2.71
VMR1P38735 SNU13YEL026W 381 nt-1.88□□□□□ -2.71
VMR1P38735 DFG10YIL049W 762 nt-1.88□□□□□ -2.71
VMR1P38735 APQ13YJL075C 417 nt-1.89□□□□□ -2.71
VMR1P38735 TAR1YLR154W-C 375 nt-1.89□□□□□ -2.71
VMR1P38735 VPS63YLR261C 327 nt-1.89□□□□□ -2.71
VMR1P38735 YDL185C-AYDL185C-A 228 nt-1.89□□□□□ -2.71
VMR1P38735 YML100W-AYML100W-A 174 nt-1.89□□□□□ -2.71
VMR1P38735 YGR228WYGR228W 345 nt-1.91□□□□□ -2.72
VMR1P38735 COX7YMR256C 183 nt-1.93□□□□□ -2.72
VMR1P38735 SDH7YDR511W 402 nt-1.93□□□□□ -2.72
VMR1P38735 YIL032CYIL032C 357 nt-1.93□□□□□ -2.72
VMR1P38735 RPS10BYMR230W 318 nt-1.93□□□□□ -2.72
VMR1P38735 LRP1YHR081W 555 nt-1.94□□□□□ -2.72
VMR1P38735 PAU9YBL108C-A 129 nt-1.94□□□□□ -2.72
VMR1P38735 RPS20YHL015W 366 nt-1.95□□□□□ -2.72
VMR1P38735 YJL182CYJL182C 318 nt-1.95□□□□□ -2.72
VMR1P38735 YCR018C-AYCR018C-A 255 nt-1.97□□□□□ -2.72
VMR1P38735 YIL066W-AYIL066W-A 444 nt-1.97□□□□□ -2.72
VMR1P38735 YGL182CYGL182C 324 nt-1.98□□□□□ -2.73
VMR1P38735 POL32YJR043C 1053 nt-1.98□□□□□ -2.73
VMR1P38735 YOL106WYOL106W 354 nt-1.98□□□□□ -2.73
VMR1P38735 AGA2YGL032C 264 nt-1.98□□□□□ -2.73
VMR1P38735 BLI1YKL061W 342 nt-1.99□□□□□ -2.73
VMR1P38735 snR5snR5 204 nt-2.01□□□□□ -2.73
VMR1P38735 BER1YLR412W 825 nt-2.01□□□□□ -2.73
VMR1P38735 snR59snR59 78 nt-2.02□□□□□ -2.73
VMR1P38735 tP(UGG)QtP(UGG)Q 72 nt-2.02□□□□□ -2.73
VMR1P38735 YIL002W-AYIL002W-A 210 nt-2.02□□□□□ -2.73
VMR1P38735 YER084W-AYER084W-A 513 nt-2.05□□□□□ -2.74
VMR1P38735 IRC16YPR038W 360 nt-2.05□□□□□ -2.74
Retrieved 100 of 7,029 protein–RNA pairs in 50.4 ms