Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 tF(GAA)P1tF(GAA)P1 73 nt0.11□□□□□ -2.39
CSH1P38287 tF(GAA)P2tF(GAA)P2 73 nt0.11□□□□□ -2.39
CSH1P38287 BER1YLR412W 825 nt0.11□□□□□ -2.39
CSH1P38287 FYV10YIL097W 1551 nt0.11□□□□□ -2.39
CSH1P38287 INP2YMR163C 2118 nt0.1□□□□□ -2.39
CSH1P38287 YFR009W-AYFR009W-A 258 nt0.1□□□□□ -2.39
CSH1P38287 BIG1YHR101C 1008 nt0.1□□□□□ -2.39
CSH1P38287 YJL047C-AYJL047C-A 135 nt0.1□□□□□ -2.39
CSH1P38287 PBI2YNL015W 228 nt0.1□□□□□ -2.39
CSH1P38287 DCP1YOL149W 696 nt0.1□□□□□ -2.39
CSH1P38287 snR72snR72 98 nt0.09□□□□□ -2.4
CSH1P38287 PAA1YDR071C 576 nt0.08□□□□□ -2.4
CSH1P38287 OLI1Q0130 231 nt0.08□□□□□ -2.4
CSH1P38287 TSC3YBR058C-A 243 nt0.08□□□□□ -2.4
CSH1P38287 YBR064WYBR064W 429 nt0.08□□□□□ -2.4
CSH1P38287 BIR1YJR089W 2865 nt0.08□□□□□ -2.4
CSH1P38287 WIP1YDR374W-A 270 nt0.07□□□□□ -2.4
CSH1P38287 MCM10YIL150C 1716 nt0.07□□□□□ -2.4
CSH1P38287 HMLALPHA2YCL067C 633 nt0.06□□□□□ -2.4
CSH1P38287 MATALPHA2YCR039C 633 nt0.06□□□□□ -2.4
CSH1P38287 TIM13YGR181W 318 nt0.06□□□□□ -2.4
CSH1P38287 YJR141WYJR141W 1044 nt0.06□□□□□ -2.4
CSH1P38287 COX12YLR038C 252 nt0.06□□□□□ -2.4
CSH1P38287 YLR285C-AYLR285C-A 171 nt0.06□□□□□ -2.4
CSH1P38287 YAP6YDR259C 1152 nt0.05□□□□□ -2.4
CSH1P38287 PTP2YOR208W 2253 nt0.04□□□□□ -2.4
CSH1P38287 SPO21YOL091W 1830 nt0.04□□□□□ -2.4
CSH1P38287 EMC4YGL231C 573 nt0.04□□□□□ -2.4
CSH1P38287 YBL008W-AYBL008W-A 240 nt0.04□□□□□ -2.4
CSH1P38287 STE5YDR103W 2754 nt0.03□□□□□ -2.4
CSH1P38287 snR51snR51 107 nt0.03□□□□□ -2.4
CSH1P38287 SEC8YPR055W 3198 nt0.01□□□□□ -2.41
CSH1P38287 YCR001WYCR001W 315 nt0.01□□□□□ -2.41
CSH1P38287 YIR018C-AYIR018C-A 138 nt0.01□□□□□ -2.41
CSH1P38287 Q0255Q0255 1419 nt0.01□□□□□ -2.41
CSH1P38287 PRP42YDR235W 1635 nt0□□□□□ -2.41
CSH1P38287 SNU56YDR240C 1479 nt0□□□□□ -2.41
CSH1P38287 COX5BYIL111W 456 nt0□□□□□ -2.41
CSH1P38287 YLR399W-AYLR399W-A 105 nt0□□□□□ -2.41
CSH1P38287 YOL014WYOL014W 375 nt0□□□□□ -2.41
CSH1P38287 YPR160W-AYPR160W-A 81 nt0□□□□□ -2.41
CSH1P38287 OST4YDL232W 111 nt-0.01□□□□□ -2.41
CSH1P38287 SDH7YDR511W 402 nt-0.01□□□□□ -2.41
CSH1P38287 YBR206WYBR206W 324 nt-0.01□□□□□ -2.41
CSH1P38287 YFR012W-AYFR012W-A 87 nt-0.02□□□□□ -2.41
CSH1P38287 PRP5YBR237W 2550 nt-0.02□□□□□ -2.41
CSH1P38287 COG8YML071C 1824 nt-0.03□□□□□ -2.41
CSH1P38287 MAM33YIL070C 801 nt-0.03□□□□□ -2.41
CSH1P38287 YML108WYML108W 318 nt-0.03□□□□□ -2.41
CSH1P38287 ASE1YOR058C 2658 nt-0.03□□□□□ -2.41
CSH1P38287 QCR9YGR183C 201 nt-0.04□□□□□ -2.42
CSH1P38287 RPS20YHL015W 366 nt-0.04□□□□□ -2.42
CSH1P38287 YOR186C-AYOR186C-A 210 nt-0.04□□□□□ -2.42
CSH1P38287 YJL020W-AYJL020W-A 258 nt-0.05□□□□□ -2.42
CSH1P38287 YJR011CYJR011C 786 nt-0.05□□□□□ -2.42
CSH1P38287 NFU1YKL040C 771 nt-0.05□□□□□ -2.42
CSH1P38287 YAL067W-AYAL067W-A 228 nt-0.05□□□□□ -2.42
CSH1P38287 YMR321CYMR321C 318 nt-0.05□□□□□ -2.42
CSH1P38287 YNL058CYNL058C 951 nt-0.05□□□□□ -2.42
CSH1P38287 YOR053WYOR053W 342 nt-0.05□□□□□ -2.42
CSH1P38287 HAL9YOL089C 3093 nt-0.05□□□□□ -2.42
CSH1P38287 YDL011CYDL011C 324 nt-0.06□□□□□ -2.42
CSH1P38287 YLR269CYLR269C 351 nt-0.06□□□□□ -2.42
CSH1P38287 YOR032W-AYOR032W-A 201 nt-0.06□□□□□ -2.42
CSH1P38287 ORC3YLL004W 1851 nt-0.07□□□□□ -2.42
CSH1P38287 RCO1YMR075W 2055 nt-0.08□□□□□ -2.42
CSH1P38287 YBL071CYBL071C 309 nt-0.08□□□□□ -2.42
CSH1P38287 YNL211CYNL211C 261 nt-0.08□□□□□ -2.42
CSH1P38287 YPL229WYPL229W 621 nt-0.08□□□□□ -2.42
CSH1P38287 RPL35AYDL191W 363 nt-0.09□□□□□ -2.42
CSH1P38287 ATG31YDR022C 591 nt-0.09□□□□□ -2.42
CSH1P38287 YDR371C-AYDR371C-A 105 nt-0.09□□□□□ -2.42
CSH1P38287 YER078W-AYER078W-A 165 nt-0.09□□□□□ -2.42
CSH1P38287 YHL046W-AYHL046W-A 327 nt-0.09□□□□□ -2.42
CSH1P38287 RPF1YHR088W 888 nt-0.09□□□□□ -2.42
CSH1P38287 THO2YNL139C 4794 nt-0.1□□□□□ -2.43
CSH1P38287 YHL041WYHL041W 450 nt-0.1□□□□□ -2.43
CSH1P38287 YLR171WYLR171W 390 nt-0.1□□□□□ -2.43
CSH1P38287 GPI15YNL038W 690 nt-0.1□□□□□ -2.43
CSH1P38287 snR190snR190 190 nt-0.1□□□□□ -2.43
CSH1P38287 RPS26AYGL189C 360 nt-0.11□□□□□ -2.43
CSH1P38287 YLR232WYLR232W 348 nt-0.11□□□□□ -2.43
CSH1P38287 MRPL50YNR022C 420 nt-0.12□□□□□ -2.43
CSH1P38287 NIP100YPL174C 2607 nt-0.12□□□□□ -2.43
CSH1P38287 SSS1YDR086C 243 nt-0.13□□□□□ -2.43
CSH1P38287 ULI1YFR026C 510 nt-0.13□□□□□ -2.43
CSH1P38287 YLR287CYLR287C 1068 nt-0.13□□□□□ -2.43
CSH1P38287 YNL146WYNL146W 303 nt-0.13□□□□□ -2.43
CSH1P38287 YOR345CYOR345C 351 nt-0.13□□□□□ -2.43
CSH1P38287 LEE1YPL054W 906 nt-0.13□□□□□ -2.43
CSH1P38287 NNF2YGR089W 2811 nt-0.14□□□□□ -2.43
CSH1P38287 snR45snR45 172 nt-0.14□□□□□ -2.43
CSH1P38287 MYO1YHR023W 5787 nt-0.15□□□□□ -2.43
CSH1P38287 YKL083WYKL083W 615 nt-0.15□□□□□ -2.43
CSH1P38287 YHR125WYHR125W 306 nt-0.16□□□□□ -2.44
CSH1P38287 ZEO1YOL109W 342 nt-0.17□□□□□ -2.44
CSH1P38287 YOR011W-AYOR011W-A 207 nt-0.17□□□□□ -2.44
CSH1P38287 YPR002C-AYPR002C-A 198 nt-0.18□□□□□ -2.44
CSH1P38287 DIE2YGR227W 1578 nt-0.19□□□□□ -2.44
CSH1P38287 HMRA2YCR096C 360 nt-0.19□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms