Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PDE6BP35913 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.88■■□□□ 1.57
PDE6BP35913 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.88■■□□□ 1.57
PDE6BP35913 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
PDE6BP35913 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.88■■□□□ 1.57
PDE6BP35913 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.88■■□□□ 1.57
PDE6BP35913 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.88■■□□□ 1.57
PDE6BP35913 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.88■■□□□ 1.57
PDE6BP35913 AC010203.1-204ENST00000548782 407 ntBASIC24.88■■□□□ 1.57
PDE6BP35913 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PDE6BP35913 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PDE6BP35913 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDE6BP35913 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDE6BP35913 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PDE6BP35913 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDE6BP35913 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDE6BP35913 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PDE6BP35913 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDE6BP35913 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.88■■□□□ 1.57
PDE6BP35913 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.87■■□□□ 1.57
PDE6BP35913 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PDE6BP35913 LIN28AP1-201ENST00000429574 405 ntBASIC24.87■■□□□ 1.57
PDE6BP35913 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.87■■□□□ 1.57
PDE6BP35913 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.87■■□□□ 1.57
PDE6BP35913 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.87■■□□□ 1.57
PDE6BP35913 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.87■■□□□ 1.57
PDE6BP35913 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PDE6BP35913 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.87■■□□□ 1.57
PDE6BP35913 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PDE6BP35913 FSCN1P1-201ENST00000568912 1481 ntBASIC24.86■■□□□ 1.57
PDE6BP35913 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PDE6BP35913 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PDE6BP35913 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.86■■□□□ 1.57
PDE6BP35913 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PDE6BP35913 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PDE6BP35913 C2orf69P3-201ENST00000565542 1120 ntBASIC24.86■■□□□ 1.57
PDE6BP35913 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.86■■□□□ 1.57
PDE6BP35913 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.86■■□□□ 1.57
PDE6BP35913 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
PDE6BP35913 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PDE6BP35913 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.86■■□□□ 1.57
PDE6BP35913 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.86■■□□□ 1.57
PDE6BP35913 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.86■■□□□ 1.57
PDE6BP35913 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.85■■□□□ 1.57
PDE6BP35913 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.85■■□□□ 1.57
PDE6BP35913 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.85■■□□□ 1.57
PDE6BP35913 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.85■■□□□ 1.57
PDE6BP35913 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.85■■□□□ 1.57
PDE6BP35913 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 WWOX-216ENST00000569818 525 ntBASIC24.85■■□□□ 1.57
PDE6BP35913 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PDE6BP35913 PTBP1P-201ENST00000554374 1601 ntBASIC24.85■■□□□ 1.57
PDE6BP35913 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PDE6BP35913 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PDE6BP35913 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PDE6BP35913 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PDE6BP35913 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.84■■□□□ 1.57
PDE6BP35913 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
PDE6BP35913 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PDE6BP35913 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PDE6BP35913 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PDE6BP35913 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.84■■□□□ 1.57
PDE6BP35913 ATP5G1P1-201ENST00000448724 379 ntBASIC24.84■■□□□ 1.57
PDE6BP35913 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.84■■□□□ 1.57
PDE6BP35913 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.84■■□□□ 1.57
PDE6BP35913 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PDE6BP35913 KRT8P20-201ENST00000423953 1409 ntBASIC24.84■■□□□ 1.57
PDE6BP35913 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
PDE6BP35913 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.83■■□□□ 1.57
PDE6BP35913 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PDE6BP35913 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PDE6BP35913 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PDE6BP35913 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PDE6BP35913 AC026271.3-201ENST00000571884 352 ntBASIC24.83■■□□□ 1.57
PDE6BP35913 AC006011.2-201ENST00000621313 1158 ntBASIC24.83■■□□□ 1.57
PDE6BP35913 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PDE6BP35913 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
PDE6BP35913 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PDE6BP35913 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
PDE6BP35913 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PDE6BP35913 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
PDE6BP35913 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PDE6BP35913 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.82■■□□□ 1.56
PDE6BP35913 MESTP1-201ENST00000404287 994 ntBASIC24.82■■□□□ 1.56
PDE6BP35913 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.82■■□□□ 1.56
PDE6BP35913 EGLN1P1-201ENST00000531623 762 ntBASIC24.82■■□□□ 1.56
PDE6BP35913 AP005242.2-201ENST00000580065 1175 ntBASIC24.82■■□□□ 1.56
PDE6BP35913 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
PDE6BP35913 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
PDE6BP35913 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.82■■□□□ 1.56
PDE6BP35913 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms