Protein–RNA interactions for Protein: P32657

CHD1, Chromo domain-containing protein 1, yeastyeast

Predictions only

Length 1,468 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHD1P32657 YDR344CYDR344C 444 nt-0.03□□□□□ -2.41
CHD1P32657 YER175W-AYER175W-A 165 nt-0.04□□□□□ -2.42
CHD1P32657 YGL239CYGL239C 315 nt-0.04□□□□□ -2.42
CHD1P32657 YOL160WYOL160W 342 nt-0.04□□□□□ -2.42
CHD1P32657 ASE1YOR058C 2658 nt-0.05□□□□□ -2.42
CHD1P32657 VMA21YGR105W 234 nt-0.05□□□□□ -2.42
CHD1P32657 PRP42YDR235W 1635 nt-0.05□□□□□ -2.42
CHD1P32657 YIR044CYIR044C 186 nt-0.06□□□□□ -2.42
CHD1P32657 APQ13YJL075C 417 nt-0.06□□□□□ -2.42
CHD1P32657 YPR039WYPR039W 336 nt-0.07□□□□□ -2.42
CHD1P32657 MRPL32YCR003W 552 nt-0.09□□□□□ -2.42
CHD1P32657 SCEIQ0160 708 nt-0.09□□□□□ -2.42
CHD1P32657 MRPS8YMR158W 468 nt-0.09□□□□□ -2.42
CHD1P32657 YPL261CYPL261C 309 nt-0.09□□□□□ -2.42
CHD1P32657 YKL202WYKL202W 582 nt-0.1□□□□□ -2.42
CHD1P32657 YMR141W-AYMR141W-A 225 nt-0.1□□□□□ -2.42
CHD1P32657 snR190snR190 190 nt-0.1□□□□□ -2.42
CHD1P32657 PAA1YDR071C 576 nt-0.1□□□□□ -2.43
CHD1P32657 COX5BYIL111W 456 nt-0.1□□□□□ -2.43
CHD1P32657 PBI2YNL015W 228 nt-0.1□□□□□ -2.43
CHD1P32657 PTP2YOR208W 2253 nt-0.11□□□□□ -2.43
CHD1P32657 YIR018C-AYIR018C-A 138 nt-0.11□□□□□ -2.43
CHD1P32657 PRP21YJL203W 843 nt-0.11□□□□□ -2.43
CHD1P32657 RPS27AYKL156W 249 nt-0.11□□□□□ -2.43
CHD1P32657 ECM9YKR004C 1134 nt-0.11□□□□□ -2.43
CHD1P32657 UBS1YBR165W 834 nt-0.11□□□□□ -2.43
CHD1P32657 PRP5YBR237W 2550 nt-0.12□□□□□ -2.43
CHD1P32657 YDL187CYDL187C 330 nt-0.12□□□□□ -2.43
CHD1P32657 RPL35AYDL191W 363 nt-0.12□□□□□ -2.43
CHD1P32657 MND1YGL183C 660 nt-0.12□□□□□ -2.43
CHD1P32657 NFU1YKL040C 771 nt-0.13□□□□□ -2.43
CHD1P32657 YPL182CYPL182C 384 nt-0.14□□□□□ -2.43
CHD1P32657 YOR186C-AYOR186C-A 210 nt-0.15□□□□□ -2.43
CHD1P32657 RPB10YOR210W 213 nt-0.15□□□□□ -2.43
CHD1P32657 OLI1Q0130 231 nt-0.16□□□□□ -2.43
CHD1P32657 YAP6YDR259C 1152 nt-0.17□□□□□ -2.44
CHD1P32657 YAL067W-AYAL067W-A 228 nt-0.17□□□□□ -2.44
CHD1P32657 IRC16YPR038W 360 nt-0.17□□□□□ -2.44
CHD1P32657 YBR064WYBR064W 429 nt-0.18□□□□□ -2.44
CHD1P32657 YBR206WYBR206W 324 nt-0.18□□□□□ -2.44
CHD1P32657 YMR254CYMR254C 309 nt-0.19□□□□□ -2.44
CHD1P32657 YLR399W-AYLR399W-A 105 nt-0.2□□□□□ -2.44
CHD1P32657 SPO21YOL091W 1830 nt-0.2□□□□□ -2.44
CHD1P32657 YOL029CYOL029C 606 nt-0.21□□□□□ -2.44
CHD1P32657 YPR160W-AYPR160W-A 81 nt-0.21□□□□□ -2.44
CHD1P32657 SSS1YDR086C 243 nt-0.22□□□□□ -2.45
CHD1P32657 YKL136WYKL136W 399 nt-0.22□□□□□ -2.45
CHD1P32657 OST4YDL232W 111 nt-0.23□□□□□ -2.45
CHD1P32657 YKL068W-AYKL068W-A 237 nt-0.23□□□□□ -2.45
CHD1P32657 MCM10YIL150C 1716 nt-0.24□□□□□ -2.45
CHD1P32657 SNU56YDR240C 1479 nt-0.24□□□□□ -2.45
CHD1P32657 YIL066W-AYIL066W-A 444 nt-0.24□□□□□ -2.45
CHD1P32657 RCO1YMR075W 2055 nt-0.24□□□□□ -2.45
CHD1P32657 YDR210WYDR210W 228 nt-0.25□□□□□ -2.45
CHD1P32657 YIL029CYIL029C 429 nt-0.26□□□□□ -2.45
CHD1P32657 HUR1YGL168W 333 nt-0.29□□□□□ -2.46
CHD1P32657 YDR371C-AYDR371C-A 105 nt-0.29□□□□□ -2.46
CHD1P32657 YPL225WYPL225W 441 nt-0.29□□□□□ -2.46
CHD1P32657 YPR170W-AYPR170W-A 186 nt-0.3□□□□□ -2.46
CHD1P32657 YBL008W-AYBL008W-A 240 nt-0.31□□□□□ -2.46
CHD1P32657 MYO1YHR023W 5787 nt-0.32□□□□□ -2.46
CHD1P32657 YGR025WYGR025W 303 nt-0.32□□□□□ -2.46
CHD1P32657 YJR087WYJR087W 351 nt-0.32□□□□□ -2.46
CHD1P32657 YLR198CYLR198C 360 nt-0.32□□□□□ -2.46
CHD1P32657 TSC3YBR058C-A 243 nt-0.32□□□□□ -2.46
CHD1P32657 YDL016CYDL016C 303 nt-0.33□□□□□ -2.46
CHD1P32657 TIM13YGR181W 318 nt-0.33□□□□□ -2.46
CHD1P32657 RPS20YHL015W 366 nt-0.33□□□□□ -2.46
CHD1P32657 ORC3YLL004W 1851 nt-0.34□□□□□ -2.46
CHD1P32657 RPS26AYGL189C 360 nt-0.34□□□□□ -2.46
CHD1P32657 IPP1YBR011C 864 nt-0.34□□□□□ -2.46
CHD1P32657 snR51snR51 107 nt-0.34□□□□□ -2.46
CHD1P32657 YAL066WYAL066W 309 nt-0.35□□□□□ -2.46
CHD1P32657 YCR038W-AYCR038W-A 126 nt-0.35□□□□□ -2.47
CHD1P32657 YER135CYER135C 393 nt-0.35□□□□□ -2.47
CHD1P32657 YHL046W-AYHL046W-A 327 nt-0.35□□□□□ -2.47
CHD1P32657 YKL044WYKL044W 321 nt-0.35□□□□□ -2.47
CHD1P32657 DCP1YOL149W 696 nt-0.35□□□□□ -2.47
CHD1P32657 COG6YNL041C 2520 nt-0.36□□□□□ -2.47
CHD1P32657 YML108WYML108W 318 nt-0.36□□□□□ -2.47
CHD1P32657 snR72snR72 98 nt-0.37□□□□□ -2.47
CHD1P32657 MPC1YGL080W 393 nt-0.38□□□□□ -2.47
CHD1P32657 MAM33YIL070C 801 nt-0.39□□□□□ -2.47
CHD1P32657 YKL023C-AYKL023C-A 228 nt-0.4□□□□□ -2.47
CHD1P32657 YCR100CYCR100C 951 nt-0.41□□□□□ -2.47
CHD1P32657 YNL211CYNL211C 261 nt-0.41□□□□□ -2.47
CHD1P32657 YOL038C-AYOL038C-A 96 nt-0.41□□□□□ -2.47
CHD1P32657 RPF1YHR088W 888 nt-0.41□□□□□ -2.48
CHD1P32657 LEE1YPL054W 906 nt-0.41□□□□□ -2.48
CHD1P32657 RAD61YDR014W 1944 nt-0.42□□□□□ -2.48
CHD1P32657 HMLALPHA2YCL067C 633 nt-0.42□□□□□ -2.48
CHD1P32657 MATALPHA2YCR039C 633 nt-0.42□□□□□ -2.48
CHD1P32657 YNL058CYNL058C 951 nt-0.42□□□□□ -2.48
CHD1P32657 ATG31YDR022C 591 nt-0.43□□□□□ -2.48
CHD1P32657 YNL146WYNL146W 303 nt-0.43□□□□□ -2.48
CHD1P32657 SEC10YLR166C 2616 nt-0.44□□□□□ -2.48
CHD1P32657 YFR012W-AYFR012W-A 87 nt-0.44□□□□□ -2.48
CHD1P32657 YJR011CYJR011C 786 nt-0.44□□□□□ -2.48
CHD1P32657 BER1YLR412W 825 nt-0.44□□□□□ -2.48
CHD1P32657 NIP1YMR309C 2439 nt-0.45□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms