Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ITM2C-210ENST00000620962 501 ntBASIC20.25■□□□□ 0.83
XPAP23025 AC006557.6-201ENST00000623071 864 ntBASIC20.25■□□□□ 0.83
XPAP23025 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
XPAP23025 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
XPAP23025 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
XPAP23025 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.24■□□□□ 0.83
XPAP23025 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
XPAP23025 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
XPAP23025 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.24■□□□□ 0.83
XPAP23025 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.24■□□□□ 0.83
XPAP23025 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.24■□□□□ 0.83
XPAP23025 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.24■□□□□ 0.83
XPAP23025 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
XPAP23025 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XPAP23025 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.23■□□□□ 0.83
XPAP23025 AC092720.2-201ENST00000602388 1665 ntBASIC20.23■□□□□ 0.83
XPAP23025 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.23■□□□□ 0.83
XPAP23025 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.23■□□□□ 0.83
XPAP23025 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XPAP23025 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
XPAP23025 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.23■□□□□ 0.83
XPAP23025 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
XPAP23025 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XPAP23025 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.22■□□□□ 0.83
XPAP23025 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
XPAP23025 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.22■□□□□ 0.83
XPAP23025 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
XPAP23025 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.22■□□□□ 0.83
XPAP23025 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
XPAP23025 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
XPAP23025 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 HLA-G-202ENST00000376815 851 ntBASIC20.22■□□□□ 0.83
XPAP23025 HLA-G-203ENST00000376818 1127 ntBASIC20.22■□□□□ 0.83
XPAP23025 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 AC023632.3-201ENST00000521633 145 ntBASIC20.22■□□□□ 0.83
XPAP23025 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.22■□□□□ 0.83
XPAP23025 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.22■□□□□ 0.83
XPAP23025 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
XPAP23025 AC008687.6-201ENST00000596318 630 ntBASIC20.22■□□□□ 0.83
XPAP23025 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
XPAP23025 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.22■□□□□ 0.83
XPAP23025 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.22■□□□□ 0.83
XPAP23025 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.22■□□□□ 0.83
XPAP23025 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XPAP23025 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
XPAP23025 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.22■□□□□ 0.83
XPAP23025 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.21■□□□□ 0.83
XPAP23025 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.21■□□□□ 0.83
XPAP23025 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 AC128676.1-201ENST00000454392 318 ntBASIC20.21■□□□□ 0.83
XPAP23025 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
XPAP23025 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.21■□□□□ 0.83
XPAP23025 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.21■□□□□ 0.83
XPAP23025 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.21■□□□□ 0.83
XPAP23025 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
XPAP23025 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XPAP23025 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
XPAP23025 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.2■□□□□ 0.82
XPAP23025 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.2■□□□□ 0.82
XPAP23025 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms