Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ERCC2P18074 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.68■□□□□ 0.9
ERCC2P18074 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
ERCC2P18074 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 MYC-209ENST00000641252 345 ntBASIC20.68■□□□□ 0.9
ERCC2P18074 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 KRT8P17-201ENST00000453110 1448 ntBASIC20.68■□□□□ 0.9
ERCC2P18074 BX119927.1-201ENST00000636596 1552 ntBASIC20.68■□□□□ 0.9
ERCC2P18074 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC2P18074 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC2P18074 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
ERCC2P18074 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ERCC2P18074 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC2P18074 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.67■□□□□ 0.9
ERCC2P18074 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.67■□□□□ 0.9
ERCC2P18074 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.67■□□□□ 0.9
ERCC2P18074 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC2P18074 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC2P18074 PCDHAC2-203ENST00000615316 3011 ntBASIC20.67■□□□□ 0.9
ERCC2P18074 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
ERCC2P18074 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC2P18074 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC2P18074 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.66■□□□□ 0.9
ERCC2P18074 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC2P18074 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.66■□□□□ 0.9
ERCC2P18074 AL355802.2-201ENST00000402069 882 ntBASIC20.66■□□□□ 0.9
ERCC2P18074 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.66■□□□□ 0.9
ERCC2P18074 AC073210.2-201ENST00000430369 194 ntBASIC20.66■□□□□ 0.9
ERCC2P18074 AC097658.1-201ENST00000475555 843 ntBASIC20.66■□□□□ 0.9
ERCC2P18074 AL031963.3-201ENST00000606441 850 ntBASIC20.66■□□□□ 0.9
ERCC2P18074 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ERCC2P18074 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
ERCC2P18074 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC2P18074 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC2P18074 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC2P18074 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.66■□□□□ 0.9
ERCC2P18074 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.65■□□□□ 0.9
ERCC2P18074 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC2P18074 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC2P18074 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ERCC2P18074 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ERCC2P18074 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.65■□□□□ 0.9
ERCC2P18074 KRT8P20-201ENST00000423953 1409 ntBASIC20.65■□□□□ 0.9
ERCC2P18074 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC2P18074 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC2P18074 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ERCC2P18074 AC069152.1-201ENST00000438030 544 ntBASIC20.65■□□□□ 0.9
ERCC2P18074 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.65■□□□□ 0.9
ERCC2P18074 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.65■□□□□ 0.9
ERCC2P18074 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
ERCC2P18074 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.65■□□□□ 0.9
ERCC2P18074 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.65■□□□□ 0.9
ERCC2P18074 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ERCC2P18074 AC133041.1-202ENST00000642053 222 ntBASIC20.65■□□□□ 0.9
ERCC2P18074 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC2P18074 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC2P18074 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.65■□□□□ 0.9
ERCC2P18074 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ERCC2P18074 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.64■□□□□ 0.9
ERCC2P18074 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC2P18074 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.64■□□□□ 0.9
ERCC2P18074 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC2P18074 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ERCC2P18074 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC2P18074 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.64■□□□□ 0.89
ERCC2P18074 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC2P18074 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC2P18074 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.64■□□□□ 0.89
ERCC2P18074 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC2P18074 AC023632.3-201ENST00000521633 145 ntBASIC20.64■□□□□ 0.89
ERCC2P18074 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC2P18074 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.64■□□□□ 0.89
ERCC2P18074 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms