Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.35■□□□□ 0.53
BMP4P12644 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.34■□□□□ 0.53
BMP4P12644 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.34■□□□□ 0.53
BMP4P12644 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.34■□□□□ 0.53
BMP4P12644 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
BMP4P12644 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.34■□□□□ 0.53
BMP4P12644 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.34■□□□□ 0.53
BMP4P12644 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
BMP4P12644 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
BMP4P12644 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BMP4P12644 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP4P12644 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BMP4P12644 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.33■□□□□ 0.53
BMP4P12644 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
BMP4P12644 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.33■□□□□ 0.53
BMP4P12644 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BMP4P12644 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BMP4P12644 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BMP4P12644 ID1-201ENST00000376105 1233 ntBASIC18.33■□□□□ 0.52
BMP4P12644 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.33■□□□□ 0.52
BMP4P12644 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.33■□□□□ 0.52
BMP4P12644 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.33■□□□□ 0.52
BMP4P12644 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.33■□□□□ 0.52
BMP4P12644 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BMP4P12644 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BMP4P12644 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
BMP4P12644 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BMP4P12644 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BMP4P12644 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BMP4P12644 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.33■□□□□ 0.52
BMP4P12644 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BMP4P12644 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.32■□□□□ 0.52
BMP4P12644 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.32■□□□□ 0.52
BMP4P12644 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 AP004607.7-201ENST00000527152 1677 ntBASIC18.32■□□□□ 0.52
BMP4P12644 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.32■□□□□ 0.52
BMP4P12644 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
BMP4P12644 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
BMP4P12644 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
BMP4P12644 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.32■□□□□ 0.52
BMP4P12644 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.32■□□□□ 0.52
BMP4P12644 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.32■□□□□ 0.52
BMP4P12644 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.32■□□□□ 0.52
BMP4P12644 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.32■□□□□ 0.52
BMP4P12644 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.32■□□□□ 0.52
BMP4P12644 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.32■□□□□ 0.52
BMP4P12644 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.32■□□□□ 0.52
BMP4P12644 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.32■□□□□ 0.52
BMP4P12644 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BMP4P12644 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP4P12644 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP4P12644 AC026185.1-201ENST00000445748 174 ntBASIC18.31■□□□□ 0.52
BMP4P12644 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.31■□□□□ 0.52
BMP4P12644 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP4P12644 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP4P12644 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.31■□□□□ 0.52
BMP4P12644 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 AC093503.3-201ENST00000624917 2352 ntBASIC18.31■□□□□ 0.52
BMP4P12644 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BMP4P12644 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BMP4P12644 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.3■□□□□ 0.52
BMP4P12644 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP4P12644 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.3■□□□□ 0.52
BMP4P12644 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BMP4P12644 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP4P12644 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BMP4P12644 AC121338.2-201ENST00000622535 1744 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms