Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 PRKY-204ENST00000533551 1019 ntBASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 AC233702.5-201ENST00000584107 538 ntBASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 AP001412.1-201ENST00000608405 714 ntBASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 AL049796.1-201ENST00000565336 1766 ntBASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 AL135905.2-201ENST00000584934 1404 ntBASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 RPS2P55-201ENST00000397318 883 ntBASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 KRASP1-201ENST00000407852 552 ntBASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 AC107956.1-201ENST00000494359 873 ntBASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 AC121338.2-201ENST00000622535 1744 ntBASIC18.94■□□□□ 0.62
RAB40ALP0C0E4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 SNORA78-201ENST00000459373 127 ntBASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 AL121829.2-201ENST00000620908 328 ntBASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RAB40ALP0C0E4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40ALP0C0E4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms