Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL5A2P05997 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
COL5A2P05997 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC26.65■■□□□ 1.86
COL5A2P05997 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC26.65■■□□□ 1.86
COL5A2P05997 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC26.65■■□□□ 1.86
COL5A2P05997 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 C2orf69P3-201ENST00000565542 1120 ntBASIC26.65■■□□□ 1.86
COL5A2P05997 USF2-205ENST00000594064 1179 ntTSL 2 BASIC26.65■■□□□ 1.86
COL5A2P05997 AL031985.4-201ENST00000642138 673 ntBASIC26.65■■□□□ 1.86
COL5A2P05997 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC26.64■■□□□ 1.86
COL5A2P05997 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL5A2P05997 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL5A2P05997 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC26.64■■□□□ 1.86
COL5A2P05997 PPP1R14BP5-201ENST00000440334 435 ntBASIC26.64■■□□□ 1.86
COL5A2P05997 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC26.64■■□□□ 1.86
COL5A2P05997 AC022616.7-201ENST00000525383 220 ntBASIC26.64■■□□□ 1.86
COL5A2P05997 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL5A2P05997 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL5A2P05997 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL5A2P05997 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC26.63■■□□□ 1.85
COL5A2P05997 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC26.63■■□□□ 1.85
COL5A2P05997 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC26.63■■□□□ 1.85
COL5A2P05997 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.63■■□□□ 1.85
COL5A2P05997 AL445675.2-201ENST00000620291 557 ntBASIC26.63■■□□□ 1.85
COL5A2P05997 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
COL5A2P05997 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL5A2P05997 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.63■■□□□ 1.85
COL5A2P05997 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL5A2P05997 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.63■■□□□ 1.85
COL5A2P05997 TSPY14P-201ENST00000303979 915 ntBASIC26.62■■□□□ 1.85
COL5A2P05997 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC26.62■■□□□ 1.85
COL5A2P05997 B3GAT3P1-201ENST00000471720 806 ntBASIC26.62■■□□□ 1.85
COL5A2P05997 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC26.62■■□□□ 1.85
COL5A2P05997 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
COL5A2P05997 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.62■■□□□ 1.85
COL5A2P05997 MYC-208ENST00000641036 567 ntBASIC26.62■■□□□ 1.85
COL5A2P05997 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
COL5A2P05997 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.62■■□□□ 1.85
COL5A2P05997 GUSBP5-202ENST00000510805 1989 ntBASIC26.62■■□□□ 1.85
COL5A2P05997 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.62■■□□□ 1.85
COL5A2P05997 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 FSCN1P1-201ENST00000568912 1481 ntBASIC26.62■■□□□ 1.85
COL5A2P05997 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC26.62■■□□□ 1.85
COL5A2P05997 GUK1-204ENST00000366721 689 ntTSL 3 BASIC26.62■■□□□ 1.85
COL5A2P05997 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
COL5A2P05997 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
COL5A2P05997 ECEL1P2-202ENST00000465689 757 ntBASIC26.62■■□□□ 1.85
COL5A2P05997 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL5A2P05997 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC26.62■■□□□ 1.85
COL5A2P05997 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC26.61■■□□□ 1.85
COL5A2P05997 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
COL5A2P05997 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL5A2P05997 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC26.61■■□□□ 1.85
COL5A2P05997 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL5A2P05997 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL5A2P05997 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.61■■□□□ 1.85
COL5A2P05997 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
COL5A2P05997 FAM87A-204ENST00000613235 858 ntBASIC26.61■■□□□ 1.85
COL5A2P05997 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
COL5A2P05997 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.6■■□□□ 1.85
COL5A2P05997 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
COL5A2P05997 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
COL5A2P05997 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.6■■□□□ 1.85
COL5A2P05997 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC26.6■■□□□ 1.85
COL5A2P05997 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC26.6■■□□□ 1.85
COL5A2P05997 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL5A2P05997 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL5A2P05997 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL5A2P05997 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL5A2P05997 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC26.59■■□□□ 1.85
COL5A2P05997 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL5A2P05997 HLA-G-202ENST00000376815 851 ntBASIC26.59■■□□□ 1.85
COL5A2P05997 HLA-G-203ENST00000376818 1127 ntBASIC26.59■■□□□ 1.85
COL5A2P05997 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.59■■□□□ 1.85
COL5A2P05997 EGLN1P1-201ENST00000531623 762 ntBASIC26.59■■□□□ 1.85
COL5A2P05997 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC26.59■■□□□ 1.85
COL5A2P05997 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms