Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PTCD1O75127 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTCD1O75127 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
PTCD1O75127 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
PTCD1O75127 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
PTCD1O75127 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PTCD1O75127 KRT8P9-201ENST00000558927 1449 ntBASIC25.88■■□□□ 1.73
PTCD1O75127 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD1O75127 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD1O75127 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD1O75127 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
PTCD1O75127 AL049796.1-201ENST00000565336 1766 ntBASIC25.88■■□□□ 1.73
PTCD1O75127 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD1O75127 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD1O75127 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.88■■□□□ 1.73
PTCD1O75127 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PTCD1O75127 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PTCD1O75127 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
PTCD1O75127 TMPOP1-202ENST00000424642 1267 ntBASIC25.88■■□□□ 1.73
PTCD1O75127 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.88■■□□□ 1.73
PTCD1O75127 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.88■■□□□ 1.73
PTCD1O75127 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.88■■□□□ 1.73
PTCD1O75127 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
PTCD1O75127 PTBP1P-201ENST00000554374 1601 ntBASIC25.88■■□□□ 1.73
PTCD1O75127 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD1O75127 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD1O75127 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.87■■□□□ 1.73
PTCD1O75127 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD1O75127 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD1O75127 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD1O75127 RBM17P1-201ENST00000453646 1190 ntBASIC25.87■■□□□ 1.73
PTCD1O75127 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.87■■□□□ 1.73
PTCD1O75127 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.87■■□□□ 1.73
PTCD1O75127 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.87■■□□□ 1.73
PTCD1O75127 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD1O75127 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.87■■□□□ 1.73
PTCD1O75127 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD1O75127 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD1O75127 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD1O75127 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD1O75127 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD1O75127 AC079598.2-202ENST00000546624 1451 ntBASIC25.86■■□□□ 1.73
PTCD1O75127 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PTCD1O75127 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.86■■□□□ 1.73
PTCD1O75127 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD1O75127 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
PTCD1O75127 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.86■■□□□ 1.73
PTCD1O75127 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
PTCD1O75127 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.86■■□□□ 1.73
PTCD1O75127 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.86■■□□□ 1.73
PTCD1O75127 AC004264.1-201ENST00000608354 794 ntBASIC25.86■■□□□ 1.73
PTCD1O75127 REXO1L10P-201ENST00000615707 1290 ntBASIC25.86■■□□□ 1.73
PTCD1O75127 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.86■■□□□ 1.73
PTCD1O75127 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD1O75127 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PTCD1O75127 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD1O75127 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.85■■□□□ 1.73
PTCD1O75127 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCD1O75127 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PTCD1O75127 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCD1O75127 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.85■■□□□ 1.73
PTCD1O75127 AP002982.1-201ENST00000492365 877 ntBASIC25.85■■□□□ 1.73
PTCD1O75127 NUDT16P1-203ENST00000513809 620 ntBASIC25.85■■□□□ 1.73
PTCD1O75127 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.85■■□□□ 1.73
PTCD1O75127 AL445228.2-201ENST00000605589 952 ntBASIC25.85■■□□□ 1.73
PTCD1O75127 AP000525.1-201ENST00000608286 694 ntBASIC25.85■■□□□ 1.73
PTCD1O75127 MIR6786-201ENST00000616843 113 ntBASIC25.85■■□□□ 1.73
PTCD1O75127 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCD1O75127 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.85■■□□□ 1.73
PTCD1O75127 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCD1O75127 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PTCD1O75127 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTCD1O75127 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.84■■□□□ 1.73
PTCD1O75127 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTCD1O75127 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.84■■□□□ 1.73
PTCD1O75127 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
PTCD1O75127 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.84■■□□□ 1.73
PTCD1O75127 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PTCD1O75127 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.84■■□□□ 1.73
PTCD1O75127 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.84■■□□□ 1.73
PTCD1O75127 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.84■■□□□ 1.73
PTCD1O75127 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.84■■□□□ 1.73
PTCD1O75127 AL121603.2-201ENST00000557373 2117 ntBASIC25.84■■□□□ 1.73
PTCD1O75127 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
PTCD1O75127 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.83■■□□□ 1.73
PTCD1O75127 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.83■■□□□ 1.73
PTCD1O75127 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.83■■□□□ 1.73
PTCD1O75127 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.83■■□□□ 1.73
PTCD1O75127 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.83■■□□□ 1.73
PTCD1O75127 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.83■■□□□ 1.73
PTCD1O75127 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.83■■□□□ 1.73
PTCD1O75127 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.83■■□□□ 1.73
PTCD1O75127 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms