Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM13O60858 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM13O60858 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM13O60858 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 AC005332.7-201ENST00000614046 2005 ntBASIC19.74■□□□□ 0.75
TRIM13O60858 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM13O60858 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM13O60858 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM13O60858 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM13O60858 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM13O60858 TREX1-205ENST00000625293 1783 ntBASIC19.73■□□□□ 0.75
TRIM13O60858 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 AL020996.1-203ENST00000536896 2307 ntBASIC19.73■□□□□ 0.75
TRIM13O60858 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
TRIM13O60858 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TRIM13O60858 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM13O60858 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM13O60858 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM13O60858 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM13O60858 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.73■□□□□ 0.75
TRIM13O60858 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM13O60858 AC005837.3-201ENST00000612163 286 ntBASIC19.73■□□□□ 0.75
TRIM13O60858 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM13O60858 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM13O60858 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM13O60858 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM13O60858 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM13O60858 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM13O60858 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM13O60858 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM13O60858 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM13O60858 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM13O60858 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRIM13O60858 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TRIM13O60858 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM13O60858 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM13O60858 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM13O60858 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM13O60858 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM13O60858 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM13O60858 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM13O60858 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM13O60858 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM13O60858 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM13O60858 AC004854.2-201ENST00000608450 1441 ntBASIC19.71■□□□□ 0.75
TRIM13O60858 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM13O60858 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM13O60858 PGM5P4-201ENST00000421970 445 ntBASIC19.71■□□□□ 0.75
TRIM13O60858 AC097381.1-201ENST00000429019 1296 ntBASIC19.71■□□□□ 0.75
TRIM13O60858 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.71■□□□□ 0.75
TRIM13O60858 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM13O60858 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM13O60858 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM13O60858 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM13O60858 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM13O60858 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM13O60858 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM13O60858 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM13O60858 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM13O60858 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM13O60858 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM13O60858 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.71■□□□□ 0.74
TRIM13O60858 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRIM13O60858 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM13O60858 AC093484.2-201ENST00000580996 2166 ntBASIC19.7■□□□□ 0.74
TRIM13O60858 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM13O60858 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM13O60858 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM13O60858 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM13O60858 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 AL356652.1-201ENST00000615962 565 ntBASIC19.7■□□□□ 0.74
TRIM13O60858 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM13O60858 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms