Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF11O60813 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PRAMEF11O60813 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEF11O60813 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF11O60813 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.4■□□□□ 0.86
PRAMEF11O60813 AC006557.6-201ENST00000623071 864 ntBASIC20.4■□□□□ 0.86
PRAMEF11O60813 BX119927.1-201ENST00000636596 1552 ntBASIC20.4■□□□□ 0.86
PRAMEF11O60813 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF11O60813 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
PRAMEF11O60813 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PRAMEF11O60813 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
PRAMEF11O60813 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
PRAMEF11O60813 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.39■□□□□ 0.86
PRAMEF11O60813 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PRAMEF11O60813 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.39■□□□□ 0.86
PRAMEF11O60813 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEF11O60813 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEF11O60813 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 SOX15-203ENST00000570788 1093 ntBASIC20.39■□□□□ 0.85
PRAMEF11O60813 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PRAMEF11O60813 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEF11O60813 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF11O60813 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 UNC93B4-201ENST00000505679 747 ntBASIC20.38■□□□□ 0.85
PRAMEF11O60813 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF11O60813 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF11O60813 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 AC099778.1-201ENST00000568593 1911 ntBASIC20.37■□□□□ 0.85
PRAMEF11O60813 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.37■□□□□ 0.85
PRAMEF11O60813 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF11O60813 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 KRT16P6-202ENST00000425692 1426 ntBASIC20.36■□□□□ 0.85
PRAMEF11O60813 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms