Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.18■□□□□ 0.5
SMAD9O15198 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD9O15198 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMAD9O15198 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SMAD9O15198 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD9O15198 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD9O15198 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD9O15198 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD9O15198 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD9O15198 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMAD9O15198 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SMAD9O15198 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.18■□□□□ 0.5
SMAD9O15198 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMAD9O15198 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 DUSP5P2-201ENST00000426873 1033 ntBASIC18.17■□□□□ 0.5
SMAD9O15198 AC073210.2-201ENST00000430369 194 ntBASIC18.17■□□□□ 0.5
SMAD9O15198 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.17■□□□□ 0.5
SMAD9O15198 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.17■□□□□ 0.5
SMAD9O15198 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.17■□□□□ 0.5
SMAD9O15198 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SMAD9O15198 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.17■□□□□ 0.5
SMAD9O15198 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.17■□□□□ 0.5
SMAD9O15198 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD9O15198 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMAD9O15198 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.16■□□□□ 0.5
SMAD9O15198 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SMAD9O15198 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMAD9O15198 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.16■□□□□ 0.5
SMAD9O15198 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.16■□□□□ 0.5
SMAD9O15198 AC133041.1-202ENST00000642053 222 ntBASIC18.16■□□□□ 0.5
SMAD9O15198 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.16■□□□□ 0.5
SMAD9O15198 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SMAD9O15198 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD9O15198 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.15■□□□□ 0.5
SMAD9O15198 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMAD9O15198 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SMAD9O15198 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.15■□□□□ 0.5
SMAD9O15198 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMAD9O15198 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.15■□□□□ 0.5
SMAD9O15198 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.15■□□□□ 0.5
SMAD9O15198 AC091874.3-201ENST00000512672 1195 ntBASIC18.15■□□□□ 0.5
SMAD9O15198 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.15■□□□□ 0.5
SMAD9O15198 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.15■□□□□ 0.5
SMAD9O15198 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMAD9O15198 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
SMAD9O15198 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD9O15198 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
SMAD9O15198 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.14■□□□□ 0.5
SMAD9O15198 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMAD9O15198 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD9O15198 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD9O15198 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD9O15198 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD9O15198 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD9O15198 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD9O15198 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD9O15198 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SMAD9O15198 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms