Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CAPN9O14815 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN9O14815 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN9O14815 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN9O14815 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN9O14815 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN9O14815 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CAPN9O14815 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.15■□□□□ 0.98
CAPN9O14815 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.15■□□□□ 0.98
CAPN9O14815 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.15■□□□□ 0.98
CAPN9O14815 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CAPN9O14815 MYC-209ENST00000641252 345 ntBASIC21.15■□□□□ 0.98
CAPN9O14815 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.15■□□□□ 0.98
CAPN9O14815 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN9O14815 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.15■□□□□ 0.98
CAPN9O14815 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN9O14815 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN9O14815 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.14■□□□□ 0.98
CAPN9O14815 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CAPN9O14815 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CAPN9O14815 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN9O14815 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN9O14815 FEM1AP1-201ENST00000431297 1995 ntBASIC21.14■□□□□ 0.98
CAPN9O14815 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CAPN9O14815 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN9O14815 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN9O14815 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN9O14815 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
CAPN9O14815 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.14■□□□□ 0.97
CAPN9O14815 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN9O14815 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CAPN9O14815 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CAPN9O14815 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN9O14815 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN9O14815 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN9O14815 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 AC073314.1-201ENST00000568729 2216 ntBASIC21.13■□□□□ 0.97
CAPN9O14815 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN9O14815 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.13■□□□□ 0.97
CAPN9O14815 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN9O14815 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN9O14815 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN9O14815 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN9O14815 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN9O14815 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CAPN9O14815 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN9O14815 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN9O14815 DPP3P2-201ENST00000416030 1696 ntBASIC21.12■□□□□ 0.97
CAPN9O14815 AC020907.5-201ENST00000624372 1936 ntBASIC21.12■□□□□ 0.97
CAPN9O14815 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPN9O14815 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
CAPN9O14815 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN9O14815 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN9O14815 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CAPN9O14815 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.11■□□□□ 0.97
CAPN9O14815 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CAPN9O14815 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.11■□□□□ 0.97
CAPN9O14815 AC083880.1-201ENST00000608266 535 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms